👤 R.A. Laskowski

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L. Volpicella, G. Punzi, V. Porcelli +494 more · 2025 · Biomolecules · MDPI · added 2026-04-20
L. Volpicella, G. Punzi, V. Porcelli, N. Gambacorta, L. Trisolini, C.L. Pierri, A. De Grassi, D.M. Muoio, R.C. Noland, J.P. Kovalik, S.E. Seiler, M.N. Davies, K.L. Debalsi, O.R. Ilkayeva, R.D. Stevens, I. Kheterpal, J. Zhang, J. Hsu, N. Fatuzzo, N. Weng, W. Michno, W. Dong, M. Kienle, Y. Dai, A. Pasca, M. Abu-Remaileh, N. Rasgon, R.R. Ramsay, R.D. Gandour, F.R. van der Leij, M.A.K. Westin, M.C. Hunt, S.E.H. Alexson, O.J. Martin, D.H. Slentz, J. An, C.B. Newgard, T.R. Koves, K.H. Fisher-Wellman, C.-T. Lin, T.E. Ryan, L.R. Reese, L.A.A. Gilliam, B.L. Cathey, D.S. Lark, C.D. Smith, P.D. Neufer, J.R. Gooding, K.E. Wong, A.H. Wittmann, L. Lindeboom, L. Kjalarsdottir, J.W. Thompson, L.G. Dubois, M.J. Brosnan, T.P. Rolph, P.A. Grimsrud, V. Mezhnina, R. Pearce, A. Poe, N. Velingkaar, A. Astafev, O.P. Ebeigbe, K. Makwana, Y. Sandlers, R.V. Kondratov, M.A.B. Melone, A. Valentino, S. Margarucci, U. Galderisi, A. Giordano, G. Peluso, N.D. Amoedo, S. Sarlak, E. Obre, P. Esteves, H. Bégueret, Y. Kieffer, B. Rousseau, A. Dupis, J. Izotte, N. Bellance, N. Giangregorio, A. Tonazzi, G. Incampo, V. Tragni, C. Indiveri, G. Fiermonte, E. Paradies, S. Todisco, C.M.T. Marobbio, F. Palmieri, T. Haitina, J. Lindblom, T. Renström, R. Fredriksson, A. Vozza, F. De Leonardis, G. Parisi, F.M. Lasorsa, L. Muto, L. Capobianco, G. Agrimi, A. Russo, P. Scarcia, V.A. Zammit, G. Jogl, L. Tong, A.C. Rufer, R. Thoma, M. Hennig, Y.S. Hsiao, I. Lasheras-Otero, I. Feliu, A. Maillo, H. Moreno, M. Redondo-Muñoz, P. Aldaz, A. Bocanegra, A. Olias-Arjona, F. Lecanda, J. Fernandez-Irigoyen, B. Musio, V. Pesce, M.M. Cavalluzzi, G. Petrosillo, G. La Piana, M.N. Sgobba, N. Schlosserová, L. Cafferati Beltrame, R. Di Lorenzo, G. Primiano, A. Tummolo, G. Paterno, R. Gorgoglione, M. Volpicella, V. Iacobazzi, V. Infantino, P. Convertini, L. Console, C. Lanave, C. Saccone, S.M. Houten, R.J.A. Wanders, D. Lacombe, R. Rossignol, C. Caggese, D. D’Elia, G. Pesole, M. Montaruli, L. Laera, F. Colella, V. Scaglione, S. Barile, A.L. Francavilla, D.I. De Luca, X. Wang, C. Yang, C. Huang, W. Wang, G. Chen, B. Bao, Y. Cheng, M. Tian, J. Song, L. Zheng, Q. Tong, R. Vishwa, B. BharathwajChetty, S. Girisa, B.S. Aswani, M.S. Alqahtani, M. Abbas, M. Hegde, A.B. Kunnumakkara, L.T.M. Le, J.R. Thompson, P.X. Dang, J. Bhandari, A. Alam, K. Zacharowski, B. Blackburn, C. Thiemermann, R. Shi, Y. Zhang, Y. Shi, S. Shi, L. Jiang, K. Jaudzems, J. Kuka, A. Gutsaits, K. Zinovjevs, I. Kalvinsh, E. Liepinsh, M. Dambrova, M. Tsoko, F. Beauseigneur, J. Gresti, I. Niot, J. Demarquoy, J. Boichot, J. Bezard, L. Rochette, P. Clouet, M. Kuwajima, H. Harashima, M. Hayashi, S. Ise, M. Sei, K.-m. Lu, H. Kiwada, Y. Sugiyama, K. Shima, D.L. Jenkins, O.W. Griffith, L.T. Izzo, S. Trefely, C. Demetriadou, J.M. Drummond, T. Mizukami, N. Kuprasertkul, A.T. Farria, P.T.T. Nguyen, N. Murali, L. Reich, H. Mao, A. Angelini, S. Li, G. Wang, L. Li, C. Patterson, X. Pi, L. Xie, A.G. Cordente, E. López-Viñas, M.I. Vázquez, P. Gómez-Puertas, G. Asins, D. Serra, F.G. Hegardt, L. Govindasamy, T. Kukar, W. Lian, B. Pedersen, Y. Gu, M. Agbandje-McKenna, S. Jin, R. McKenna, D. Wu, A.R. Kim, R.J. Rylett, B.H. Shilton, Y. Cai, C.N. Cronin, A.G. Engel, K. Ohno, L.B. Hersh, D.W. Rodgers, J.D. McGarry, N.F. Brown, A. Mattevi, A.M. Waterhouse, J.B. Procter, D.M.A. Martin, M. Clamp, G.J. Barton, M.A. Larkin, G. Blackshields, N.P. Brown, R. Chenna, P.A. McGettigan, H. McWilliam, F. Valentin, I.M. Wallace, A. Wilm, R. Lopez, J.F. Chase, S. Violante, L. Ijlst, J. Ruiter, J. Koster, H. van Lenthe, M. Duran, I.T. de Almeida, F.V. Ventura, P.K. Tubbs, M. Morillas, B. Rubí, J. Clotet, J. Ariño, A. Valencia, K. Kashfi, R.L. Mynatt, E.A. Park, G.A. Cook, R.J. Wanders, W.L. Delano, S. Bromberg, A.C. Wallace, R.A. Laskowski, J.M. Thornton, T.R. Altamimi, P.D. Thomas, A.M. Darwesh, N. Fillmore, M.U. Mahmoud, L. Zhang, A. Gupta, R. Al Batran, J.M. Seubert, G.D. Lopaschuk, M.A. Schroeder, H.J. Atherton, M.S. Dodd, P. Lee, L.E. Cochlin, G.K. Radda, K. Clarke, D.J. Tyler, A. Pop, M. Williams, E.A. Struys, M. Monné, E.E.W. Jansen, W.A. Kanhai, M.R.F. Ojeda, A. Tessa, C. Dionisi-Vici, M.R. Baumgartner, Y.H. Chien, C. Loguercio, H.O. De Baulny, M.-C. Nassogne, M. Schiff, R. Wibom, V. Töhönen, M. Barbaro, F.H. Sterky, T. Kucinski, K. Naess, M. Jonsson, S. Edvardson, C. Jalas, D. Soiferman, Y. Kellner, A. Shaag, S.H. Korman, N.D. Fraenkel, M. Ruggiu, M.F. Hossain, A. Menga, A. Castegna, F. Invernizzi, S. Baratta, R. Pons, W. Chung, B. Garavaglia, A. Ribes, R. Parini, M.D. Huertas, M.A. Shahroor, I. Dweikat, M.A. Di Noia, M. Gur, G. Agostino, T. Rinaldi, G. Gasparre, A. Onofrio, G. Redavid, A. Santarsiero, N.C. Williams, D. Iacobazzi, G. De Stefano, L.A.J. O’Neill, X. Li, F. Zhao, Z. Zhao, X. Zhao, H. Meng, D. Zhang, S. Zhao, M. Ding, C. Amat di San Filippo, M.R.G. Taylor, L. Mestroni, L.D. Botto, N. Longo, K. Gotvaldová, J. Špačková, K. Smolková, G. Benard, F. Furt, H. Begueret, E. Passerieux, J.P. Delage, J.M. Baste, P. Moreau, J. Novotný, K. Baslarová, P. Ježek, L. Rossmeislová, J. Gojda, E.M. Palmieri, R. Holewinski, C.L. McGinity, N. Maio, J.M. Weiss, K.M. Miranda, T.A. Rouault, T. Andresson, S. Sharma, X. Sun, S. Agarwal, R. Rafikov, S. Dasarathy, S. Kumar, S.M. Black, J.M. Rutkowsky, T.A. Knotts, K.D. Ono-Moore, C.S. McCoin, S. Huang, D. Schneider, S. Singh, S.H. Adams, D.H. Hwang, L. Amadori, C. Calcagno, D.M. Fernandez, S. Koplev, N. Fernandez, R. Kaur, P. Mury, N.S. Khan, S. Sajja, R. Shamailova, A. Ta-Shma, P. Stepensky, S. Zenvirt, O. Elpeleg, A.J.J.T. Rein, T. Hu, C.H. Liu, M. Lei, Q. Zeng, H. Tang, N. Zhang, C. Garcia, C.J. Andersen, C.N. Blesso, M. Wang, K. Wang, X. Liao, H. Hu, L. Chen, L. Meng, W. Gao, Q. Li, G. Ghilardi, L. Paruzzo, J. Svoboda, E.A. Chong, A.A. Shestov, I.J. Cohen, G. Gabrielli, S.D. Nasta, P. Porazzi, J.B. Baell, J.W.M. Nissink, N. Wiedemar, D.A. Hauser, P. Mäser, M. Favia, A. Muscella, L. Guerra, C. Jose, T. Zhao, X. Mu, Q. You, A.D.R. Campos-Contreras, M. Díaz-Muñoz, F.G. Vázquez-Cuevas, L. Nicassio, F. Fracasso, G. Sirago, C. Musicco, A. Picca, E. Marzetti, R. Calvani, P. Cantatore, M.N. Gadaleta, P. Cassano, A.M.S. Lezza, V. Capelli, A.M. Timperio, M. Calvani, L. Mosconi Show less
Carnitine O-acetyltransferase (CRAT) is a key mitochondrial enzyme involved in maintaining metabolic homeostasis by mediating the reversible transfer of acetyl groups between acetyl-CoA and carnitine. Show more
Carnitine O-acetyltransferase (CRAT) is a key mitochondrial enzyme involved in maintaining metabolic homeostasis by mediating the reversible transfer of acetyl groups between acetyl-CoA and carnitine. This enzymatic activity ensures the optimal functioning of mitochondrial carbon flux by preventing acetyl-CoA accumulation, buffering metabolic flexibility, and regulating the balance between fatty acid and glucose oxidation. CRAT’s interplay with the mitochondrial carnitine shuttle, involving carnitine palmitoyltransferases (CPT1 and CPT2) and the carnitine carrier (SLC25A20), underscores its critical role in energy metabolism. Emerging evidence highlights the structural and functional diversity of CRAT and structurally related acetyltransferases across cellular compartments, illustrating their coordinated role in lipid metabolism, amino acid catabolism, and mitochondrial bioenergetics. Moreover, the structural insights into CRAT have paved the way for understanding its regulation and identifying potential modulators with therapeutic applications for diseases such as diabetes, mitochondrial disorders, and cancer. This review examines CRAT’s structural and functional aspects, its relationships with carnitine shuttle members and other carnitine acyltransferases, and its broader role in metabolic health and disease. The potential for targeting CRAT and its associated pathways offers promising avenues for therapeutic interventions aimed at restoring metabolic equilibrium and addressing metabolic dysfunction in disease states. Show less
đź“„ PDF DOI: 10.3390/biom15020216
amino-acid mitochondria review
K.M. Okuda, L.S. Churchman, R.D. Chapman +252 more · 2022 · Nucleic acids research · Oxford University Press · added 2026-04-20
K.M. Okuda, L.S. Churchman, R.D. Chapman, M. Heidemann, C. Hintermair, D. Eick, E. Compe, J.M. Egly, P. Di Lello, L.M. Miller Jenkins, C. Mas, C. Langlois, E. Malitskaya, A. Fradet-Turcotte, J. Archambault, P. Legault, J.G. Omichinski, M. Okuda, A. Tanaka, M. Satoh, S. Mizuta, M. Takazawa, Y. Ohkuma, Y. Nishimura, L.M. Jenkins, T.N. Jones, B.D. Nguyen, T. Hara, H. Yamaguchi, J.D. Dikeakos, E. Appella, M. Lussier-Price, S. Soni, T. Morse, G. Arseneault, J. Lafrance-Vanasse, J.J. Bieker, K. Araki, K. Ohtani, K. Potempa, M.S. Kobor, P.R. Chabot, L. Raiola, L. Cappadocia, M. Kinoshita, E. Kakumu, K. Sugasawa, Y. Nakazawa, C. Guo, T. Ogi, V. Gervais, V. Lamour, A. Jawhari, F. Frindel, E. Wasielewski, S. Dubaele, J.C. Thierry, B. Kieffer, A. Poterszman, H.T. Chen, Y. He, C. Yan, J. Fang, C. Inouye, R. Tjian, I. Ivanov, E. Nogales, B.J. Greber, T.H.D. Nguyen, P.V. Afonine, P.D. Adams, D.B. Toso, J. Cavanagh, W.J. Fairbroher, A.G., III Palmer, N.J. Skelton, F. Delaglio, S. Grzesiek, G.W. Vuister, G. Zhu, J. Pfeifer, A. Bax, B.A. Johnson, R.A. Blevins, G. Cornilescu, A.T. Brünger, C.D. Schwieters, J.J. Kuszewski, N. Tjandra, G.M. Clore, J.P. Linge, M.A. Williams, C.A. Spronk, A.M. Bonvin, M. Nilges, R.A. Laskowski, J.A.C. Rullmann, M.W. MacArthur, R. Kaptein, J.M. Thornton, R. Koradi, M. Billeter, K. Wüthrich, T. Ekimoto, J. Kurita, M. Ikeguchi, S. Yamashita, A.R. Lehmann, C. McQuin, A. Goodman, V. Chernyshev, L. Kamentsky, B.A. Cimini, K.W. Karhohs, M. Doan, L. Ding, S.M. Rafelski, D. Thirstrup, P. Cramer, D.A. Bushnell, J. Fu, A.L. Gnatt, B. Maier-Davis, N.E. Thompson, R.R. Burgess, A.M. Edwards, P.R. David, R.D. Kornberg, F. del Río-Portilla, A. Gaskell, D. Gilbert, J.A. Ladias, G. Wagner, K. Kayukawa, Y. Makino, S. Yogosawa, T. Tamura, G.L. Christensen, C.D. Kelstrup, C. Lyngsø, U. Sarwar, R. Bøgebo, S.P. Sheikh, S. Gammeltoft, J.V. Olsen, J.L. Hansen, T. Dodd, J.A. Tainer, S.E. Tsutakawa, S.M. Vos, L. Farnung, M. Boehning, C. Wigge, A. Linden, H. Urlaub, E. Evans, J. Fellows, A. Coffer, R.D. Wood, A. Tapias, J. Auriol, D. Forget, J.H. Enzlin, O.D. Schärer, F. Coin, B. Coulombe, W.L. de Laat, N.G. Jaspers, J.H. Hoeijmakers, H. Spåhr, G. Calero, L. Minakhin, S. Bhagat, A. Brunning, E.A. Campbell, S.A. Darst, R.H. Ebright, K. Severinov, S. Nouraini, J.D. Friesen, D. Xu, S. Nelson, M. Lee, A. Ishiguro, Y. Nogi, K. Hisatake, M. Muramatsu, A. Ishihama, Q. Tan, M.H. Prysak, N.A. Woychik, J.F. Briand, F. Navarro, P. Rematier, C. Boschiero, S. Labarre, M. Werner, G.V. Shpakovski, P. Thuriaux, A.I. Garrido-Godino, M.C. García-López, V. Goler-Baron, M. Selitrennik, O. Barkai, G. Haimovich, R. Lotan, M. Choder, Z.R. Qiu, B. Schwer, S. Shuman, L. Daniel, E. Cerutti, L.M. Donnio, J. Nonnekens, C. Carrat, S. Zahova, P.O. Mari, G. Giglia-Mari, Y. Yang, J. Hu, C.P. Selby, W. Li, A. Yimit, Y. Jiang, A. Sancar, Y. van der Weegen, H. Golan-Berman, T.E.T. Mevissen, K. Apelt, R. González-Prieto, J. Goedhart, E.E. Heilbrun, A.C.O. Vertegaal, D. van den Heuvel, J.C. Walter, Y. Hara, Y. Oka, O. Komine, Y. Daigaku, M. Isono, M. Shimada, N. Deger, L.A. Lindsey-Boltz, C. Engel, S. Sainsbury, A.C. Cheung, D. Kostrewa, N.A. Hoffmann, A.J. Jakobi, M. Moreno-Morcillo, S. Glatt, J. Kosinski, W.J.H. Hagen, C. Sachse, C.W. Müller Show less
Abstract In eukaryotes, three RNA polymerases (RNAPs) play essential roles in the synthesis of various types of RNA: namely, RNAPI for rRNA; RNAPII for mRNA and most snRNAs; and RNAPIII for tRNA and Show more
Abstract In eukaryotes, three RNA polymerases (RNAPs) play essential roles in the synthesis of various types of RNA: namely, RNAPI for rRNA; RNAPII for mRNA and most snRNAs; and RNAPIII for tRNA and other small RNAs. All three RNAPs possess a short flexible tail derived from their common subunit RPB6. However, the function of this shared N-terminal tail (NTT) is not clear. Here we show that NTT interacts with the PH domain (PH-D) of the p62 subunit of the general transcription/repair factor TFIIH, and present the structures of RPB6 unbound and bound to PH-D by nuclear magnetic resonance (NMR). Using available cryo-EM structures, we modelled the activated elongation complex of RNAPII bound to TFIIH. We also provide evidence that the recruitment of TFIIH to transcription sites through the p62–RPB6 interaction is a common mechanism for transcription-coupled nucleotide excision repair (TC-NER) of RNAPI- and RNAPII-transcribed genes. Moreover, point mutations in the RPB6 NTT cause a significant reduction in transcription of RNAPI-, RNAPII- and RNAPIII-transcribed genes. These and other results show that the p62–RPB6 interaction plays multiple roles in transcription, TC-NER, and cell proliferation, suggesting that TFIIH is engaged in all RNAP systems. Show less
đź“„ PDF DOI: 10.1093/nar/gkab612
NMR synthesis