đŸ‘€ A. Nayak

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Also published as: P.H.A. Nayak, Prakash Nayak
articles
L.A. Zhou, Q. Zhou, M.D. Siegelin +351 more · 2024 · Cells · MDPI · added 2026-04-20
L.A. Zhou, Q. Zhou, M.D. Siegelin, J.M. Angelastro, P. Paerhati, J. Liu, Z. Jin, T. Jakos, S. Zhu, L. Qian, J. Zhu, Y. Yuan, P.D. Canoll, J. Kuo, M. Weicker, A. Costa, J.N. Bruce, L.A. Greene, T.K. Sears, M. Zhang, X. Wang, N. Yang, X. Zhu, Z. Lu, Y. Cai, B. Li, Y. Zhu, X. Li, Y. Wei, K.H. Klempnauer, X. Sun, P. Jefferson, S. Wang, J. Wu, W. Zhao, M. Li, S. Li, L. Hartl, J. Duitman, M.F. Bijlsma, C.A. Spek, C.C. Cates, A.D. Arias, L.S. Nakayama Wong, M.W. Lame, M. Sidorov, G. Cayanan, D.J. Rowland, J. Fung, G. Karpel-Massler, B.A. Horst, C. Shu, L. Chau, T. Tsujiuchi, P. Canoll, N. Pasquier, T.T.T. Nguyen, D. Banerjee, S. Boboila, S. Okochi, A.V. Kadenhe-Chiweshe, G. Lopez, A. Califano, E.P. Connolly, D.J. Yamashiro, S.E. Monaco, M. Szabolcs, D. Merino, P. Vaupel, G. Multhoff, A. Fukushi, H.D. Kim, Y.C. Chang, C.H. Kim, M. Jaworska, J. Szczudlo, A. Pietrzyk, J. Shah, S.E. Trojan, B. Ostrowska, K.A. Kocemba-Pilarczyk, T. Ackermann, G. Hartleben, C. Muller, G. Mastrobuoni, M. Groth, B.A. Sterken, M.A. Zaini, S.A. Youssef, H.R. Zuidhof, S.R. Krauss, Z. Wang, J. Pang, L. Wang, Q. Dong, D. Jin, Z. Chai, Y. Yang, Z. Gu, X. Cai, W. Ye, L. Kong, X. Qiu, L. Ying, T.C. Chan, Y.L. Shiue, C.F. Li, K. Balamurugan, J.M. Wang, H.H. Tsai, S. Sharan, M. Anver, R. Leighty, E. Sterneck, Y. Zhang, L. Li, F. Chu, H. Wu, X. Xiao, J. Ye, K. Li, A. Subramanian, P. Tamayo, V.K. Mootha, S. Mukherjee, B.L. Ebert, M.A. Gillette, A. Paulovich, S.L. Pomeroy, T.R. Golub, E.S. Lander, C.M. Lindgren, K.F. Eriksson, S. Sihag, J. Lehar, P. Puigserver, E. Carlsson, M. Ridderstrale, E. Laurila, M. Maslowska, H.W. Wang, K. Cianflone, S. Mizuno, R. Seishima, J. Yamasaki, K. Hattori, M. Ogiri, S. Matsui, K. Shigeta, K. Okabayashi, O. Nagano, P. Bajwa, K. Kordylewicz, A. Bilecz, R.R. Lastra, K. Wroblewski, Y. Rinkevich, E. Lengyel, H.A. Kenny, S. Xiao, W. Nai-Dong, Y. Jin-Xiang, T. Long, L. Xiu-Rong, G. Hong, Y. Jie-Cheng, Z. Fei, C. Zhou, L.H. Lyu, H.K. Miao, T. Bahr, Q.Y. Zhang, T. Liang, H.B. Zhou, G.R. Chen, Y. Bai, P.C. Hart, M. Mao, A.L. de Abreu, K. Ansenberger-Fricano, D.N. Ekoue, D. Ganini, A. Kajdacsy-Balla, A.M. Diamond, R.D. Minshall, M.E. Consolaro, M. Shimizu, N. Tanaka, S. Dagdeviren, R.T. Lee, N. Wu, N. Qayyum, M. Haseeb, M.S. Kim, S. Choi, E. Yoshihara, N.M. Alhawiti, S. Al Mahri, M.A. Aziz, S.S. Malik, S. Mohammad, S.Y. Hong, F.X. Yu, Y. Luo, T. Hagen, L. Shen, J.M. O’Shea, M.R. Kaadige, S. Cunha, B.R. Wilde, A.L. Cohen, A.L. Welm, D.E. Ayer, L. Feng, R. Ding, X. Qu, Y. Li, T. Shen, R. Li, J. Zhang, Y. Ru, X. Bu, Q. Yan, L. Gong, H. Xu, B. Liu, X. Fang, D. Yu, T. Wei, Y. Wang, Y. Liang, H. Wang, B. Chen, Q. Mao, W. Xia, T. Zhang, X. Song, Z. Zhang, L. Xu, G. Dong, Y. Chen, J. Ning, W. Cao, T. Du, J. Jiang, X. Feng, B. Zhang, B. Kalyanaraman, G. Cheng, M. Hardy, M. You, T.M. Ashton, W.G. McKenna, L.A. Kunz-Schughart, G.S. Higgins, L. Liu, P.K. Patnana, X. Xie, D. Frank, S.C. Nimmagadda, A. Rosemann, M. Liebmann, L. Klotz, B. Opalka, C. Khandanpour, N. Chen, Y.S. Zhou, L.C. Wang, J.B. Huang, Z. Wu, W. Wang, L. Wei, A.M. Stevens, E.S. Schafer, M. Terrell, R. Rashid, H. Paek, M.B. Bernhardt, A. Weisnicht, W.T. Smith, N.J. Keogh, A. Kapur, P. Mehta, A.D. Simmons, S.S. Ericksen, G. Mehta, S.P. Palecek, M. Felder, Z. Stenerson, A. Nayak, J.M.A. Dominguez, H. Dykstra, C. LaRose, C. Fisk, A. Waldhart, X. Meng, G. Zhao, A.N. Waldhart, A.S. Peck, E.A. Boguslawski, Z.B. Madaj, J. Wen, K. Veldkamp, M. Hollowell, B. Zheng, L.C. Cantley, A. Shaywitz, Y. Dagon, C. Tower, G. Bellinger, C.H. Shen, J. Asara, T.E. McGraw, S.J. Qualls-Histed, C.P. Nielsen, J.A. MacGurn, S. Kim, J. Ge, D. Kim, J.J. Lee, Y.J. Choi, W. Chen, J.W. Bowman, S.S. Foo, L.C. Chang, Q. Liang, M. Pliszka, L. Szablewski, P.B. Ancey, C. Contat, E. Meylan, M.H. Chan, Y.F. Yang, C.H. Li, M. Hsiao, P. Patwari, W.A. Chutkow, K. Cummings, V.L. Verstraeten, J. Lammerding, E.R. Schreiter, J. Deng, T. Pan, Z. Liu, C. McCarthy, J.M. Vicencio, L. Cao, G. Alfano, A.A. Suwaidan, M. Yin, R. Beatson, H. Gong, P. Zhang, X. Hu Show less
We have designed cell-penetrating peptides that target the leucine zipper transcription factors ATF5, CEBPB and CEBPD and that promote apoptotic death of a wide range of cancer cell types, but not nor Show more
We have designed cell-penetrating peptides that target the leucine zipper transcription factors ATF5, CEBPB and CEBPD and that promote apoptotic death of a wide range of cancer cell types, but not normal cells, in vitro and in vivo. Though such peptides have the potential for clinical application, their mechanisms of action are not fully understood. Here, we show that one such peptide, Dpep, compromises glucose uptake and glycolysis in a cell context-dependent manner (in about two-thirds of cancer lines assessed). These actions are dependent on induction of tumor suppressor TXNIP (thioredoxin-interacting protein) mRNA and protein. Knockdown studies show that TXNIP significantly contributes to apoptotic death in those cancer cells in which it is induced by Dpep. The metabolic actions of Dpep on glycolysis led us to explore combinations of Dpep with clinically approved drugs metformin and atovaquone that inhibit oxidative phosphorylation and that are in trials for cancer treatment. Dpep showed additive to synergistic activities in all lines tested. In summary, we find that Dpep induces TXNIP in a cell context-dependent manner that in turn suppresses glucose uptake and glycolysis and contributes to apoptotic death of a range of cancer cells. Show less
📄 PDF DOI: 10.3390/cells13121025
amino-acid
S. Hangan, J. Lodge, A. Odani +529 more · 2024 · Molecules · MDPI · added 2026-04-20
S. Hangan, J. Lodge, A. Odani, T. Yamaguchi, I. Persson, N. Hadjiliadis, E. Sletten, S.A. Mehrdad, A. Cucchiarini, J.L. Mergny, S.K. Noureini, S. Muthaiah, A. Bhatia, M. Kannan, A.N. Srivastva, M. Stankovic, J. Kljun, N.L.J. Stevanovic, J. Lazic, S.S. Bogojevic, S. Vojnovic, M. Zlatar, J. Nikodinovic-Runic, I. Turel, M.I. Djuran, I. Aleksic, A. Veselinovic, B.D. Glisic, H. Alshater, A.I. Al-Sulami, S.A. Aly, E.M. Abdalla, M.A. Sakr, S.S. Hassan, S. de la Mata Moratilla, S. Casado Angulo, N. GĂłmez-Casanova, J.L. Copa-Patiño, I. Heredero-Bermejo, F.J. de la Mata, S. GarcĂ­a-Gallego, A. Hangan, A. Turza, R.L. Lucaciu, B. Sevastre, E. Pall, L.S. Oprean, G. Borodi, D. Rusu, A. Stănilă, I.O. Marian, C.O. Marian, M. Rusu, R. Lucaciu, T.J. Hubin, P.N. Amoyaw, K.D. Roewe, N.C. Simpson, R.D. Maples, T.N. Carder Freeman, A.N. Cain, J.G. Le, S.J. Archibald, S.I. Khan, E. Bortolamiol, F. Visentin, T. Scattolin, I. Kostova, A.C. Hangan, L. Dican, E. PĂĄll, R.L. Stan, S. Gheorghe-Cetean, A. Tsoupras, S. Pafli, C. Stylianoudakis, K. Ladomenou, C.A. Demopoulos, A. Philippopoulos, J. Wlodarczyk, J. Krajewska, L. Szeleszczuk, P. Szalwinska, A. Gurba, S. Lipiec, P. Taciak, R. Szczepaniak, I. Mlynarzuk-Bialy, J. Fichna, C. Abate, F. Carnamucio, O. Giuffre, C. Foti, C. Chuong, C.M. DuChane, E.M. Webb, P. Rai, J.M. Marano, C.M. Bernier, J.S. Merola, J. Weger-Lucarelli, L. Oprean, P. Kumar, S. Gorai, M.K. Santra, B. Mondal, D. Manna, M. Sirajuddin, S. Ali, A. Badshah, J.D. Watson, F.H.C. Crick, B. Maddox, P.J. Kennelly, K.M. Botham, O. McGuinness, V.W. Rodwell, P.A. Weil, R.A. Harvey, D.R. Ferrier, J.M. Berg, J.L. Tymoczko, G.J. Gatto, L. Stryer, J.A. Cowan, P. Yakovchuk, E. Protozanova, M.D. Frank-Kamenetskii, M.J. Hannon, I. Bertini, H.B. Gray, S.J. Lippard, J.S. Valentine, Z. Shakked, G. Guerstein-Guzikevich, M. Eisenstein, F. Frolow, D. Rabinovich, J.C. Garcia-Ramos, R. Galindo-Murillo, F. Cortez-Guzman, L. Ruiz-Azuara, S. Neidle, M. HĂ€gerlöf, P. Papsai, C.S. Chow, S.K.C. Elmroth, J. François, N.T. Thuong, C. HĂ©lĂšne, J.L. Huppert, T.A. Brooks, S. Kendrick, L. Hurley, X. Li, Y. Peng, J. Ren, X. Qu, Y. Akiyama, S.M. Hecht, L.H. Hurley, J. Zhou, C. Wei, G. Jia, X. Wang, Z. Feng, C. Li, A. Mukherjee, K.M. Vasquez, E. Marian, L.G. Vicas, J. Tunde, M. Muresan, Z. Diaconeasa, C. Ionescu, R.G. Pearson, G. Barone, A. Terenzi, A. Lauria, A.M. Almerico, J.M. Leal, N. Busto, B. Garcia, J. Vinje, J.A. Parkinson, P.J. Sadler, T. Brown, A.A. Almaqwashi, T. Paramanathan, I. Rouzina, M.C. Williams, F.R. Keene, J.A. Smith, J.G. Collins, A. Rilak, R. Masnikosa, I. Bratsos, E. Alessio, S.K. Srivastava, T.C. Johnstone, K. Suntharalingam, S. Cetean, T. Ciuleanu, D.C. Leucuta, C. Cainap, A.M. Constantin, I. Cazacu, S. Cainap, A. Gherman, Y. He, Y. Ding, D. Wang, W. Zhang, W. Chen, X. Liu, W. Qin, X. Qian, H. Chen, Z. Guo, E. StefĂ no, F. De Castro, A. Ciccarese, A. Muscella, S. Marsigliante, M. Benedetti, F.P. Fanizzi, P.M. Takahara, A.C. Rosenzweig, C.A. Frederick, M. Demeunynck, C. Bailly, W.D. Wilson, K. Nakamoto, M. Tsuboi, G.D. Strahan, B.M. Zeglis, V.C. Pierre, J.K. Barton, C. Shobha Devi, B. Thulasiram, R.R. Aerva, P. Nagababu, T. Biver, F. Secco, M. Venturini, C.E. Maciel-Flores, J.A. Lozano-Alvarez, E.Y. BiviĂĄn-Castro, F. Jia, S. Wang, Y. Man, B. Liu, P. Modrich, A. Erxleben, E. Dumont, A. Monari, D.L. Morris, G.S. Khan, A. Shah, D. Zia-ur-Rehman, B.J. Pages, D.L. Ang, E.P. Wright, J.R. Aldrich-Wright, S.M. Nelson, L.R. Ferguson, W.A. Denny, L. Winkler, F. Cortes-Guzman, T.E. Cheatham, O. Sarpataki, N.K. Olah, M. Taulescu, I. Marcus, C. Cătoi, M.M. GonzĂĄlez-Ballesteros, L. SĂĄnchez-SĂĄnchez, A. Espinoza-GuillĂ©n, J. Espinal-EnrĂ­quez, C. MejĂ­a, E. HernĂĄndez-Lemus, P.H. von Hippel, A.H. Marcus, S. Komeda, T. Moulaei, K. Kruger Woods, M. Chikuma, N.P. Farrell, L.D. Williams, T. Jany, A. Moreth, C. Gruschka, A. Sischka, A. Spiering, M. Dieding, Y. Wang, S. Haji Samo, A. Stammler, H. Bögge, S. Li, B. Yuan, J. Zhang, L. Yue, H. Hou, J. Hu, S. Chen, B.R. Kirthan, M.C. Prabhakara, H.S. Bhojya Naik, P.H.A. Nayak, E.I. Naik, U. Saha, S. Chatterjee, M. Dolai, G.S. Kumar, A.M. Abu-Dief, N.H. Alotaibi, E.S. Al-Farraj, H.A. Qasem, S. Alzahrani, M.K. Mahfouz, A. Abdou, B. Kurt, H. Temel, M. Atlan, S. Kaya, H.A. Kiwaan, A.S. El-Mowafy, A.A. El-Bindary, S. Baskaran, M.N. Krishnan, M. Arumugham, R. Kumar, N. Kumar, R. Kaushal, P. Awasthi, A. Kellett, Z. Molphy, C. Slator, V. McKee, V.G. Vaidyanathan, B.U. Nair, R. Vijayalakshmi, P. Karacan, O. Okay, S. Phukan, S. Mitra, S. Nafisi, A.A. Saboury, N. Keramat, J.F. Neault, H.A. Tajmir-Riahi, P. Sathyadevi, P. Krishnamoorthy, R.R. Butorac, A.H. Cowley, N.S.P. Bhuvanesh, N. Dharmaraj, F. Arjmand, S. Parveen, M. Afzal, M. Shahid, J.B. Lepecq, C. Paoletti, J.L. Garcia-Gimenez, M. Gonzalez-Alvarez, M. Liu-Gonzalez, B. Macias, J. Borras, G. Alzuet, M. Aslanoglu, M. Zaheer, R. Qureshi, Z. Akhter, M.F. Nazar, M. Ngoepe, H. Clayton, P. Mucha, P. Hikisz, K. GwoĆșdziƄski, U. Krajewska, A. Leniart, E. Budzisz, E.F. Garman, J.R. Helliwell, E.P. Mitchell, A.N. Boynton, K.M. Boyle, M.J. Waring, S. Da Vela, D.I. Svergun, L.A. Feigin, P.P.P. Kumar, D.K. Lim, T.H. Jensen, M. Bech, O. Bunk, M. Thomsen, A. Menzel, A. Bouchet, G. Le Duc, R. Feidenhans, F. Pfeiffer, S. Sidhu, G. Falzon, S.A. Hart, J.G. Fox, R.A. Lewis, K.K.W. Siu, D.A. Jacques, J. Trewhella, N. Allec, M. Choi, N. Yesupriya, B. Szychowski, M.R. White, M.G. Kann, E.D. Garcin, M.C. Daniel, A. Badano, Y. Qu, J.B. Mangrum, A. Hegmans, S.J. Berners-Price, L. Ronconi, X. Filip, C. Tripon, C. Morari, C. Filip, T. Urathamakul, D.J. Waller, J.L. Beck, S.F. Ralph, X. Fan, J. Wang, X. Zhang, Z. Yang, J.C. Zhang, L. Zhao, H. Peng, J. Lei, H.W. Wang, J.L. Rubinstein, X. Benjin, L. Ling, A. Punjani, D.J. Fleet, M.A. Brubaker, A. Goldstein, Y. Soroka, M. FruĆĄic-Zlotkin, I. Popov, R. Kohen, M. Havrdova, K. Polakova, J. Skopalik, M. Vujtek, A. Mokdad, M. Homolkova, J. Tucek, J. Nebesarova, R. Zboril, M. Malatesta, M.R. RodrĂ­guez, M.J. Lavecchia, B.Z. ParajĂłn-Costa, A.C. GonzĂĄlez-BarĂł, M.R. GonzĂĄlez-BarĂł, E. CattĂĄneo, A.N. Alaghaz, S. Aldulmani, A. Yadav, K. Poonia, R. Ștefan, K.R. Fox, M.V. Villa, R. Lapresa, J. Hernandez-Gil, F. Sanz, J.B. Chaires, M. Mudasir, E.T. Wahyuni, D.H. Tjahjono, N. Yoshioka, H. Inoue, P. Jaividhya, R. Dhivya, M.A. Akbarsha, M. Palaniandavar, N. Raman, R. Jeyamurugan, A. Sakthivel, L. Mitu, A. Prisecaru, R.G. Kipping, E.J. Peterson, J.L. GarcĂ­a-GimĂ©nez, J. HernĂĄndez-Gil, A. MartĂ­nez-RuĂ­z, A. Castiñeiras, M. Liu-GonzĂĄles, F.V. PallardĂł, J. BorrĂĄs, G. Alzuet Piña, M. Swathi, D.S. Shankar, S. Daravath, N. Ganji, P.V.A. Lakshmi, R. Shivaraj, A. PĂ©rez, F.J. Luque, M. Orozco, N.M. Henriksen, D.R. Davis, D.A. Case, T.E.I. Cheatham, T. Darden, H. Gohlke, R. Luo, K.M. Merz, A. Onufriev, C. Simmerling, B. Wang, R.J. Woods, M.B. Peters, Y. Yang, L. FĂŒsti-MolnĂĄr, M.N. Weaver, M. Sahadevan, M. Sundaram, K. Subramanian Show less
DNA structure has many potential places where endogenous compounds and xenobiotics can bind. Therefore, xenobiotics bind along the sites of the nucleic acid with the aim of changing its structure, its Show more
DNA structure has many potential places where endogenous compounds and xenobiotics can bind. Therefore, xenobiotics bind along the sites of the nucleic acid with the aim of changing its structure, its genetic message, and, implicitly, its functions. Currently, there are several mechanisms known to be involved in DNA binding. These mechanisms are covalent and non-covalent interactions. The covalent interaction or metal base coordination is an irreversible binding and it is represented by an intra-/interstrand cross-link. The non-covalent interaction is generally a reversible binding and it is represented by intercalation between DNA base pairs, insertion, major and/or minor groove binding, and electrostatic interactions with the sugar phosphate DNA backbone. In the present review, we focus on the types of DNA–metal complex interactions (including some representative examples) and on presenting the methods currently used to study them. Show less
📄 PDF DOI: 10.3390/molecules29184361
DNA-binding coordination-chemistry review
Anna Chandrasekar Murali, Prakash Nayak, Krishnan Venkatasubbaiah · 2022 · Dalton Transactions · Royal Society of Chemistry · added 2026-04-20
Tetra-coordinated boron compounds offer a plethora of luminescent materials. Different chelation around the boron center (O,O-, N,C-, N,O-, and N,N-) has been explored to tune the electronic a Show more
Tetra-coordinated boron compounds offer a plethora of luminescent materials. Different chelation around the boron center (O,O-, N,C-, N,O-, and N,N-) has been explored to tune the electronic and photophysical properties of tetra-coordinated boron compounds. A number of fascinating molecules with interesting properties such as aggregation induced emission, mechanochromism and tunable emission by changing the solvent polarity were realised. Owing to their rich and unique properties, some of the molecules have shown applications in making optoelectronic devices, probes and so on. This perspective provides an overview of the recent developments of tetra-coordinated boron compounds and their potential applications. Show less
📄 PDF DOI: 10.1039/D2DT00160H
imaging review synthesis