👤 Ankit Ankit

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2
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2
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Also published as: Patel, Ankit
articles
Charron, Nicholas E., Bonneau, Klara, Pasos-Trejo, Aldo S. +18 more · 2025 · Nature Publishing Group · Nature · added 2026-04-20
The development of a universal protein coarse-grained model has been a long-standing challenge. A coarse-grained model with chemical transferability has now been developed by combining deep-learning m Show more
The development of a universal protein coarse-grained model has been a long-standing challenge. A coarse-grained model with chemical transferability has now been developed by combining deep-learning methods with a large and diverse training set of all-atom protein simulations. The model can be used for extrapolative molecular dynamics on new sequences. Show less
📄 PDF DOI: 10.1038/s41557-025-01874-0
ML amino-acid
Ashwini Kumar, Ayushi Chaudhary, Ankit Ankit +4 more · 2025 · Inorganic Chemistry Frontiers · Royal Society of Chemistry · added 2026-04-20
Although immunogenic cell death (ICD) has garnered significant attention in the realm of “cold” tumor therapies, effectively stimulating strong immune responses with minimal side effects, thei Show more
Although immunogenic cell death (ICD) has garnered significant attention in the realm of “cold” tumor therapies, effectively stimulating strong immune responses with minimal side effects, their real-time monitoring in deep-seated tumors remains challenging. There is no available drug that covers these two bases with one swing. Herein, we report a proof-of-concept for the rational design and synthesis of a novel class of five redox-active iron(III) complexes, ([FeIII(L1–L5)2]), based on sirtinol analogs bearing adamantane moieties. These complexes show potential as modest stimulators of ICD, as indicated by the expression of key ICD markers. The lead compound, Fe(L1)2, exhibits promiscuous nanoscale aggregation in RPMI-1640 cell culture media, characterized by a stable hydrodynamic effective diameter ranging from 50 nm to 70 nm over 48 hours. Fe(L1)2 nanoaggregates with enhanced efficacy against MCF-7 cells undergo an energy-dependent endocytic cellular-uptake pathway. In our proposed two-for-one approach, the DAMP marker indicates that our Fe(L1)2 nanoaggregates are iron-based complexes that warm up the tumor environment by maximizing the antitumor immune response, and Fe(L1–L3)2 display well-defined photoacoustic NIR-II spectra that underscore their suitability in future for high-resolution imaging applications. Show less
📄 PDF DOI: 10.1039/D5QI00575B
Fe MCF-7 anticancer imaging immunogenic synthesis