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Rhodium(III) Dihalido Complexes: The Effect of Ligand Substitution and Halido Coordination on Increasing Cancer Cell Potency.
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Version: Supplemental Material
Article:
Lord, RM, Zegke, M, Basri, AM et al. (2021) Rhodium(III) Dihalido Complexes: The Effect
of Ligand Substitution and Halido Coordination on Increasing Cancer Cell Potency.
Inorganic Chemistry, 60 (3). pp. 2076-2086. ISSN: 0020-1669
https://doi.org/10.1021/acs.inorgchem.0c03704
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Electronic Supplementary Information
Rhodium(III) dihalido complexes: the effect of ligand substitution
and halido coordination on increasing cancer cell potency
Rianne M. Lord,[a,b]* Markus Zegke,[b] Aida M. Basri,[c] Christopher M. Pask[c] and Patrick C.
McGowan[c]
a
School of Chemistry, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, U.K. Email:
r.lord@uea.ac.uk
b
School of Chemistry and Biosciences, University of Bradford, Bradford, BD7 1DP, U.K.
c
School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, U.K.
1
Electronic Supplementary Information
X-ray Crystallographic Analysis
Table S 1 X-ray crystallographic data for complexes 1, 3 ( and ), 4a and 4b, s.u.s shown in parenthesis
Complex
1
3 ()
3 ()
4a
4b
CCDC Number
1978080
1978078
2042715
1978082
1978081
Empirical formula
C25H21Cl2F2N4O3Rh
C24H17Br2Cl2N4O2Rh
C24H17Br2Cl2N4O2Rh
C26H25Cl2I2N4O4Rh
C27H24Cl2I2N5O3Rh
Formula weight
637.278
727.046
727.046
885.132
894.143
Temperature/K
100.1(4)
99.9(3)
100.3(9)
100.2(4)
120.3(7)
Crystal system
orthorhombic
monoclinic
monoclinic
monoclinic
monoclinic
Space group
P212121
Cc
Cc
P21/c
P21/n
a/Å
10.5456(3)
9.3613(3)
9.3527(2)
17.9801(8)
8.1441(3)
b/Å
12.0060(4)
23.8677(7)
23.9723(6)
10.3200(4)
32.8058(12)
c/Å
19.5775(7)
11.4997(3)
11.5084(3)
17.7408(9)
11.0381(4)
α/°
90
90
90
90
90
β/°
90
100.495(3)
100.627(2)
115.036(6)
90.522(3)
γ/°
90
90
90
90
90
Volume/Å3
2478.72(14)
2526.43(13)
2535.99(11)
2982.6(3)
2948.98(18)
Z
4
4
4
4
4
ρcalcg/cm3
1.708
1.911
1.904
1.971
2.014
μ/mm-1
0.956
4.081
4.065
2.860
23.116
F(000)
1277.3
1411.6
1411.6
1698.2
1729.4
Crystal size/mm3
0.478 × 0.202 × 0.132
0.093 × 0.06 × 0.04
0.21 x 0.15 x 0.09
0.412 × 0.366 × 0.316 0.102 × 0.072 × 0.035
Radiation
Mo Kα (λ = 0.71073)
Mo Kα (λ = 0.71073)
Mo Kα (λ = 0.71073
Mo Kα (λ = 0.71073)
Cu Kα (λ = 1.54184)
6.38 to 59.06
8.46 to 147.42
2Θ range for data
collection/°
Index ranges
6.62 to 59.08
6.42 to 51.36
-14 ≤ h ≤ 10, -15 ≤ k ≤ -8 ≤ h ≤ 11, -25 ≤ k ≤
15, -19 ≤ l ≤ 27
28, -14 ≤ l ≤ 14
4.74 to 60.72
-11 ≤ h ≤ 12, -23 ≤ k ≤ -24 ≤ h ≤ 20, -13 ≤ k ≤ -9 ≤ h ≤ 9, -38 ≤ k ≤ 40,
31, -14 ≤ l ≤ 12
14, -24 ≤ l ≤ 24
-13 ≤ l ≤ 13
Reflections collected
9366
6634
6999
19498
13120
Independent
reflections
5515 [Rint = 0.0438,
Rsigma = 0.0893]
3782 [Rint = 0.0263,
Rsigma = 0.0397]
5022 [Rint = 0.0176,
Rsigma = 0.0299]
7240 [Rint = 0.0499,
Rsigma = 0.0645]
5776 [Rint = 0.0571,
Rsigma = 0.0721]
Data/restraints/para
meters
5515/0/336
3782/2/316
7240/0/356
5776/0/363
5022/2/316
Goodness-of-fit on F2
1.040
1.047
1.022
1.051
1.064
Final R indexes [I>=2σ
(I)]
R1 = 0.0524, wR2 =
0.1092
R1 = 0.0228, wR2 =
0.0513
R1 = 0.0243, wR2 =
0.0614
R1 = 0.0499, wR2 =
0.0972
R1 = 0.0565, wR2 =
0.1339
Final R indexes [all
data]
R1 = 0.0636, wR2 =
0.1170
R1 = 0.0238, wR2 =
0.0519
R1 = 0.0258, wR2 =
0.0619
R1 = 0.0668, wR2 =
0.1063
R1 = 0.0707, wR2 =
0.1438
Largest diff.
peak/hole / e Å-3
1.38/-0.90
0.47/-0.35
3.04/-2.54
2.14/-1.50
Flack parameter
-0.07(5)
0.017(6)
--
--
0.78/-0.45
0.025(5)
2
Electronic Supplementary Information
Table S 2 Selected bond angles (°) for complexes 1, 3 ( and ), 4a and 4b, s.u.s shown in parentheses
Bonds
1
3 ()
3 ()
4a
4b
X(1)-Rh(1)-X(2)
X(1)-Rh(1)-O(2)
X(2)-Rh(1)-O(2)
X(1)-Rh(1)-N(1)
X(2)-Rh(1)-N(1)
X(1)-Rh(1)-N(2)
X(2)-Rh(1)-N(2)
X(1)-Rh(1)-N(3)
X(2)-Rh(1)-N(3)
N(1)-Rh(1)-O(2)
N(2)-Rh(1)-O(2)
N(3)-Rh(1)-O(2)
N(1)-Rh(2)-N(2)
N(1)-Rh(1)-N(3)
N(2)-Rh(1)-N(3)
92.33(7)
177.09(15)
88.46(13)
89.41(17)
96.79(18)
90.46(18)
175.70(18)
96.85(19)
88.75(17)
93.3(2)
88.9(2)
80.4(2)
80.0(2)
171.5(2)
94.2(2)
93.00(4)
177.14(8)
86.00(8)
89.02(10)
96.06(10)
90.32(10)
175.11(9)
97.62(10)
86.14(10)
93.74(12)
90.85(13)
79.65(12)
80.40(14)
172.90(13)
96.98(13)
92.93(3)
177.19(7)
86.09(7)
89.25(9)
96.06(9)
90.50(9)
175.10(9)
97.66(9)
86.09(9)
93.47(11)
90.65(11)
79.66(11)
80.48(12)
172.67(12)
96.92(12)
90.86(5)
176.28(11)
91.14(11)
89.18(12)
95.31(13)
89.48(13)
175.45(12)
96.48(13)
88.26(13)
93.75(15)
88.78(16)
80.45(15)
80.16(17)
173.27(17)
96.21(17)
177.88(7)
86.76(16)
91.98(16)
175.3(2)
88.28(18)
90.58(19)
90.60(19)
92.26(18)
89.16(18)
97.7(2)
176.3(3)
78.4(2)
79.7(3)
175.3(2)
104.3(3)
Table S 3 X-ray crystallographic data for complexes 6 and 7, s.u.s shown in parenthesis
Complex
6
7
CCDC Number
1978079
1978083
Empirical formula
C27H24Cl2I2N5O3Rh
C27H24Br2I2N5O3Rh
Formula weight
894.143
983.045
Temperature/K
100.0(3)
120.2(4)
Crystal system
monoclinic
monoclinic
Space group
Cc
Cc
15.5643(6)
a/Å
15.4740(11)
b/Å
9.1361(6)
9.1945(4)
c/Å
21.4115(13)
21.4844(10)
α/°
90
90
β/°
95.700(6)
95.650(4)
γ/°
90
90
Volume/Å3
3012.0(4)
3059.6(2)
Z
4
4
ρcalcg/cm3
1.972
2.134
μ/mm-1
2.832
5.225
F(000)
1714.2
1855.4
Crystal size/mm3
0.118 × 0.108 × 0.031
0.15 × 0.09 × 0.07
Radiation
Mo Kα (λ = 0.71073)
Mo Kα (λ = 0.71073)
2Θ range for data collection/°
6.22 to 52.74
6.18 to 62.3
Index ranges
-16 ≤ h ≤ 19, -11 ≤ k ≤ 9, -26 ≤ l ≤ 21
-21 ≤ h ≤ 22, -11 ≤ k ≤ 12, -22 ≤ l ≤ 28
Reflections collected
9196
10526
Independent reflections
4805 [Rint = 0.0675, Rsigma = 0.1033]
6153 [Rint = 0.0368, Rsigma = 0.0602]
Data/restraints/parameters
4805/98/309
6153/2/363
Goodness-of-fit on F2
1.052
1.018
Final R indexes [I>=2σ (I)]
R1 = 0.0512, wR2 = 0.0906
R1 = 0.0383, wR2 = 0.0806
Final R indexes [all data]
R1 = 0.0675, wR2 = 0.1016
R1 = 0.0432, wR2 = 0.0840
Largest diff. peak/hole / e Å-3
1.01/-0.91
1.00/-0.77
Flack parameter
-0.06(4)
0.040(12)
3
Electronic Supplementary Information
Table S 4 Selected bond angles (°) for complexes 6 and 7, s.u.s shown in parentheses
Bonds
6
7
X(1)-Rh(1)-X(2)
X(1)-Rh(1)-O(2)
X(2)-Rh(1)-O(2)
X(1)-Rh(1)-N(1)
X(2)-Rh(1)-N(1)
X(1)-Rh(1)-N(2)
X(2)-Rh(1)-N(2)
X(1)-Rh(1)-N(3)
X(2)-Rh(1)-N(3)
N(1)-Rh(1)-O(2)
N(2)-Rh(1)-O(2)
N(3)-Rh(1)-O(2)
N(1)-Rh(2)-N(2)
N(1)-Rh(1)-N(3)
N(2)-Rh(1)-N(3)
177.34(5)
88.1(2)
89.4(2)
89.9(3)
89.5(3)
92.4(3)
90.0(3)
88.4(3)
91.9(3)
94.9(4)
174.9(4)
78.2(3)
80.0(4)
173.0(4)
106.7(5)
174.38(2)
88.21(14)
86.66(14)
89.13(16)
89.20(14)
91.31(16)
93.63(16)
92.10(15)
89.01(145
96.8(2)
175.7(2)
77.3(2)
79.0(2)
173.9(2)
107.0(2)
4
Electronic Supplementary Information
Characterization by FTIR and PXRD
FTIR Spectroscopy for Complex 3 Isomers
Figure S 1 IR spectra of complexes 3a (red), 3b (orange) and 3c (yellow).
PXRD of Complexes 3 and Complex 7
Figure S 2 Simulated and experimental PXRD diffractograms for a) complex 3 and b) complex 7.
5
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Characterization NMR Spectroscopy
Complex 3 – 1st synthetic products
Figure S 3 1H NMR spectra of complexes 3a (red) and 3c (yellow) (d6-acetone, 300 K, 300 MHz).
Variable Temperature NMR Spectroscopy of Complex 3 – 1st synthetic product
Figure S 4 Temperature-dependent 1H NMR spectra of complex 3c (d6-acetone, 300 K, 300 MHz).
6
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NMR for Complex 3 – 2nd synthetic product
Figure S 5 Image of the combined crystals under a microscope
Figure S 6 1H NMR spectra of complexes 3-combined (red) and 3-yellow microcrystals and 3-orange single crystals
(d6-acetone, 300 K, 400 MHz).
7
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Figure S 7 1H NMR spectra of complexes 3-combined (red) and 3-yellow microcrystals and 3-orange single crystals
(CDC3, 300 K, 400 MHz).
8
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NMR Characterisation and Exchange Studies of Complexes 1, 4, 5 and 8
Comparison NMR spectroscopy of complexes 1 and 5
1
H NMR spectra were recorded for [(3’-F)(3’-FH)RhCl2] (1, black) and [(3’-F)(3’-FH)RhI2] (5, blue) (Figure
S4) at room temperature and show that complex 1 exhibits multiple isomers in solution, whereas complex 5
has only one isomer in solution. This can be clearly observed for the NH proton of the ligand, which appears
at a chemical shift of ~12.5 ppm.
Figure S 8 1H NMR spectrum of [(3’-F)(3’-FH)RhCl2] (1, black) and [(3’-F)(3’-FH)RhI2] (5, blue) confirming the
different number of isomer present (CDCl3, 300 K, 400 MHz)
9
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NMR’s in Chloroform
Complex 1 + N-(3-iodophenyl)picolinamide
Scheme S1 Ligand exchange of [(3’-F)(3’-FH)RhCl2] (1) with ligand 3’-IH in CDCl3.
Figure S 9 Overlay of the product (black) from the reaction of [(3’-F)(3’-FH)RhCl2] (1, dark green) + ligand 3’-IH
(blue). The spectra for [(3’-I)(3’-IH)RhCl2] (4, dark blue) and ligand 3’-FH (dark red) are also included for
comparison (CDCl3, 300 K, 400 MHz).
The 1H NMR study of an equimolar mixture of [(3’-F)(3’-FH)RhCl2] (1) and N-(3-iodophenyl)picolinamide
(3’-IH) in CDCl3 shows the formation of a mixed species which is possibly [(3’-F)(3’-IH)RhCl2] or [(3’-FH)(3’I)RhCl2] and the dissociation of N-(3-fluorophenyl)picolinamide (3’-FH). The resonances of [(3’-L)(3’LH)RhCl2] are “swamped” by the free ligand due to the complex's poor solubility in CDCl3. In addition, the 1H
NMR spectra of [(3’-F)(3’-FH)RhCl2] (1) and [(3’-I)(3’-IH)RhCl2] (4) are essentially indistinguishable, thus
inhibiting a direct in situ analysis of a mixed [(3’-F)(3’-IH)RhCl2] or [(3’-FH)(3’-I)RhCl2] complex.
10
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Complex 4 + N-(3-fluorophenyl)picolinamide
Scheme S2 Attempted ligand exchange of [(3’-I)(3’-IH)RhCl2] (4) with 3’-FH in CDCl3.
Figure S 10 Overlay of the product (black) from the reaction of [(3’-I)(3’-IH)RhCl2] (4, dark blue) + 3’-FH (dark
red). The spectra for [(3’-F)(3’-FH)RhCl2] (1, dark green) and 3’-IH (blue) are also included for comparison
(CDCl3, 300 K, 400 MHz).
The 1H NMR study of an equimolar mixture of [(3’-I)(3’-IH)RhCl2] (4) and N-(3-fluorophenyl)picolinamide
(3’-IH) in CDCl3 confirms that the N-(3-fluorophenyl)picolinamide is the ligand which is most easily
substituted, and that the formation of the complex [(3’-I)(3’-IH)RhCl2] (4) is energetically favoured. The
spectrum
of
the
mixture
shows
essentially
only
the
resonances
of
the
added
N-(3-
fluorophenyl)picolinamide ligand, as the resonances of [(3’-X)(3’-XH)RhCl2] are again “swamped” by the
free ligand due to the complex's poor solubility in CDCl3. No resonances of liberated N-(3fluorophenyl)picolinamide can be observed.
11
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Complex 5 + N-(3-iodophenyl)picolinamide
Scheme S3 Test reaction for the ligand exchange between [(3’-F)(3’-FH)RhI2] (5) with 3’-IH in CDCl3.
Figure S 11 Overlay of the product (black) from the reaction of [(3’-F)(3’-FH)RhI2] (5) + 3’-IH (blue) The spectra
for ligand 3’-FH (dark red) is also included for comparison (CDCl3, 300 K, 400 MHz).
The 1H-NMR study of an equimolar mixture of [(3’-F)(3’-FH)RhI2] (5) and N-(3-iodophenyl)picolinamide
(3’-IH) in CDCl3 shows free 3’-IH exclusively. No ligand exchange can be observed as no resonances of
liberated N-(3-fluorophenyl)picolinamide (3’-FH) are present. The extremely poor solubility of [(3’-F)(3’FH)RhI2] in CDCl3 does not allow for a direct comparison of [(3’-F)(3’-FH)RhI2] (5) and [(3’-I)(3’-IH)RhI2] (8)
and a mixed complex [(3’-F)(3’-IH)RhI2] in this solvent. Therefore, the spectra for complex [(3’-I)(3’-IH)RhI2]
(8) + 3’-FH was not recorded.
12
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NMR’s in Dimethyl sulfoxide
Complex 1 + N-(3-iodophenyl)picolinamide
Scheme S4 Test reaction for the ligand exchange between [(3’-F)(3’-FH)RhCl2] (1) with 3’-IH in d6-DMSO.
Figure S 12 Overlay of the product (black) from the reaction of [(3’-F)(3’-FH)RhCl2] (1, dark green) + 3’-IH
(blue). The spectra for ligand 3’-FH (dark red) is also included for comparison (d6-DMSO, 300 K, 400 MHz).
The 1H-NMR study of an equimolar mixture of [(3’-F)(3’-FH)RhCl2] (1) and N-(3-iodophenyl)picolinamide
(3’-IH) in d6-DMSO shows no changes in the resonances of the starting material and only an additional set
of resonances for the free 3’-IH. No resonances of free 3’-FH can be observed, indicating no ligand exchange
for [(3’-L)(3’-LH)RhCl2] complexes in DMSO.
13
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Complex 5 + N-(3-iodophenyl)picolinamide
Scheme S5 Test reaction for the ligand exchange between [(3’-F)(3’-FH)RhI2] (5) with 3’-IH in d6-DMSO.
Figure S 13 Overlay of the product (black) from the reaction of [(3’-F)(3’-FH)RhI2] (5) + 3’-IH (blue) The spectra
for ligand 3’-FH (dark red) is also included for comparison (d6-DMSO, 300 K, 400 MHz).
The 1H-NMR study of an equimolar mixture of [(3’-F)(3’-FH)RhI2] (5) and N-(3-iodophenyl)picolinamide
(3’-IH) in d6-DMSO confirms that complexes of the type [(3’-L)(3’-LH)RhI2] do not undergo ligand exchange
in DMSO. Along with the resonances of the starting material an additional set of resonances for the free 3’IH can be seen, with no resonances of free 3’-FH, further indicating a lack of ligand exchange in solution.
14
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Stability and Ligand Exchange Studies of Complex 3 and 7 over 96 h
Figure S 14 Stability study of complex 3 in DMSO:PBS (80:20 v/v) over 96 h (d6-DMSO, 300 K, 400 MHz).
15
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Figure S 15 Stability study of complex 7 in MeCN:PBS (80:20 v/v) over 96 h (d3-MeCN, 300 K, 400 MHz).
16
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Figure S 16 Exchange studies of complex 3 with N-(3-chlorophenyl)picolinamide ligand (L’) in DMSO:PBS (80:20
v/v) over 96 h (d6-DMSO, 300 K, 400 MHz).
17
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Figure S 17 Overlay of complex 3 and 3’-BrH in MeCN a) without PBS, b) with PBS (80:20 v/v) after initial and c)
with PBS (80:20 v/v) after 96 h (d3-MeCN, 300 K, 400 MHz).
18
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Figure S 18 Exchange studies of complex 7 with N-(3-chlorophenyl)picolinamide ligand (L’) in MeCN:PBS (80:20
v/v) over 96 h (d3-MeCN, 300 K, 400 MHz).
19
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Figure S 19 Overlay of complex 7 and 3’-BrH in MeCN a) without PBS, b) with PBS (80:20 v/v) after initial and c)
with PBS (80:20 v/v) after 96 h (d3-MeCN, 300 K, 400 MHz).
20
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96 h Chemosensitivity Studies
Figure S 20 IC50 values (µM) ± SD of complexes 3, 7, 3-Ru and 7-Ru and CDDP against HCT116 p53+/+,
HCT116 p53-/-, A549, FM55, MIA PaCa-2, A2780, A2780cisR, MCF-7 and ARPE-19.
24 and 72 h Chemosensitivity Studies
Table S 5 IC50 values (µM) ± SD for complexes 3, 7, 3-Ru, 7-Ru and CDDP against HCT116 p53+/+, HCT116 p53-/-,
and ARPE-19, after 24 h and 72 h incubation periods.
Complexes
HCT116 p53+/+
3
24 h
>100
72 h
>100
7
1.7 ± 0.1 (21.8)
3-Ru
7-Ru
CDDP
2.1 ± 0.2 (1.1)
1.7 ± 0.1 (1.6)
77 ± 2 (0.5)
1.33 ± 0.08
(27.8)
2.02 ± 0.08 (1.2)
1.29 ± 0.05 (2.1)
71.6 ± 0.4 (0.6)
IC50 values (µM) ± SD
HCT116 p53-/24 h
72 h
>100
>100
ARPE-19
24 h
>100
72 h
>100
>100 (< 0.4)
>100 (< 0.4)
37 ± 1
33 ± 1
2.3 ± 0.2 (1.0)
4.3 ± 0.1 (0.6)
>100 (< 0.4)
2.10 ± 0.09 (1.1)
4.07 ± 0.07 (0.7)
>100 (< 0.4)
2.41 ± 0.07
2.7 ± 0.2
41 ± 1
2.2 ± 0.3
2.5 ± 0.3
37 ± 1
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Selectivity Factors (SF)
Table S 6 Selectivity Factors (SF) for complexes 7, 3-Ru, 7-Ru and CDDP when comparing the IC50 values of the
isogenic colorectal cancer cell lines (HCT116 p53+/+ and HCT116 p53-/-) after 24, 72 and 96 h incubation periods.
Complexes
SF towards HCT116 p53-/-
SF towards HCT116 p53+/+
24 h
72 h
96 h
24 h
72 h
96 h
7
0.02
0.01
0.90
57.47
75.16
1.11
3-Ru
0.92
0.96
1.20
1.09
1.04
0.83
7-Ru
0.38
0.32
0.80
2.61
3.16
1.26
CDDP
0.77
0.72
0.42
1.30
1.40
2.36
LogP, Solubility and Pharmacokinetics
Table S 7 Predictions of logP, solubility and pharmacokinetics for complexes 1-8, 3-Ru and 7-Ru, using Swiss
ADME.1
Complex
1
Log P
(MLOG)
3.54
LogS
(ESOL)
-8.33
Solubility
mg/ mL
2.83x106
Class
Poorly soluble
GI
absorption
High
2
3.91
-8.75
1.16x106
Poorly soluble
High
3
4
5
6
7
8
3-Ru
7-Ru
4.10
4.29
4.10
4.29
4.48
4.67
4.10
4.48
-9.38
-9.91
-9.09
-9.96
-10.59
-11.12
-9.37
-10.58
3.07x107
1.02x107
6.48x107
9.19x108
2.38x108
7.66x109
3.15x107
2.43x108
Poorly soluble
Poorly soluble
Poorly soluble
Poorly soluble
Insoluble
Insoluble
Poorly soluble
Insoluble
High
High
High
High
High
High
High
Hugh
Pharmacokinetics
P-gp substrate, CYP1A2 inhibitor,
CYP2C19 inhibitor
BBB permeant, P-gp substrate,
CYP3A4 inhibitor
BBB permeant, P-gp substrate
BBB permeant, P-gp substrate
BBB permeant, P-gp substrate
BBB permeant, P-gp substrate
P-gp substrate
BBB permeant, P-gp substrate
BBB permeant, P-gp substrate
P-gp substrate
References
(1)
Daina, A.; Michielin, O.; Zoete, V. SwissADME: A Free Web Tool to Evaluate Pharmacokinetics, DrugLikeness and Medicinal Chemistry Friendliness of Small Molecules. Sci Rep 2017, 7 (Article number:
42717). https://doi.org/10.1038/srep42717.
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