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Synthesis, characterization, theoretical, molecular docking and in vitro biological activity studies of Ru(II) (η6-p-cymene) complexes with novel aniline substituted aroyl selenoureas.
Journal of Biomolecular Structure and Dynamics
ISSN: 0739-1102 (Print) 1538-0254 (Online) Journal homepage: https://www.tandfonline.com/loi/tbsd20
Synthesis, characterization, theoretical, molecular
docking and in vitro biological activity studies of
6
Ru(II) (η -p-cymene) complexes with novel aniline
substituted aroyl selenoureas
Moideen Musthafa, Ramaiah Konakanchi, Rakesh Ganguly, Chandrasekar
Balachandran, Shin Aoki & Anandaram Sreekanth
To cite this article: Moideen Musthafa, Ramaiah Konakanchi, Rakesh Ganguly, Chandrasekar
Balachandran, Shin Aoki & Anandaram Sreekanth (2020): Synthesis, characterization, theoretical,
6
molecular docking and in vitro biological activity studies of Ru(II) (η -p-cymene) complexes with
novel aniline substituted aroyl selenoureas, Journal of Biomolecular Structure and Dynamics, DOI:
10.1080/07391102.2020.1778531
To link to this article: https://doi.org/10.1080/07391102.2020.1778531
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JOURNAL OF BIOMOLECULAR STRUCTURE AND DYNAMICS
https://doi.org/10.1080/07391102.2020.1778531
Synthesis, characterization, theoretical, molecular docking and in vitro biological
activity studies of Ru(II) (g6-p-cymene) complexes with novel aniline substituted
aroyl selenoureas
Moideen Musthafaa, Ramaiah Konakanchib, Rakesh Gangulyc, Chandrasekar Balachandrand, Shin Aokid,e and
Anandaram Sreekantha
a
Department of Chemistry, National Institute of Technology, Tiruchirappalli, Tamil Nadu, India; bChemistry Division, H&S Department, Malla
Reddy Engineering College for Women (Autonomous Institution), Hyderabad, Telangana, India; cDivision of Chemistry & Biological
Chemistry, Nanyang Technological University, Singapore, Singapore; dFaculty of Pharmaceutical Sciences, Tokyo University of Science, Noda,
Japan; eResearch Institute for Science and Technology, Tokyo University of Science, Yamazaki, Noda, Japan
Communicated by Ramaswamy H. Sarma
ABSTRACT
A sequence of aroyl selenourea ligands (L1–L3) substituted by aniline and their Ru(II) (g6-p-cymene)
complexes (1-3), [Ru(II) (g6-p-cymene) L] (L ¼ monodentate aroyl selenourea ligand) have been synthesized and characterized the composition of the ligands and their metal complexes. The molecular
structures of ligand L1 and complex 3 were also confirmed by single XRD crystal method. The singlecrystal XRD study showed that aroyl selenourea ligand coordinates with Ru via Se novel neutral monodentate atom. In vitro DNA interaction studies were investigated by Fluorescence and UV-Visible spectroscopic methods which showed that the intercalative mode of binding is in the order of 1 > 2 > 3
with Ru(II) (g6-p-cymene) complexes. Spectroscopic methods have been used for measuring the binding affinity of bovine serum albumin to complex. Moreover, the cytotoxic study of complexes (1–3)
were evaluated against HeLa S3, A549, and IMR90 cells, resulting in complexes 1 and 2 showed promising cytotoxic activity against HeLa S3 cell with IC50 values of 24 and 26 mM, respectively. Also, the
morphological changes of HeLa S3 and A549 cells were confirmed by fluorescence microscope in the
presence of complexes 1 and 2 using AO (acridine orange, 200 mM) and EB (ethidium bromide,
100 mM). In addition, the docking results strongly support the protein binding studies of
the complexes.
1. Introduction
Metal complexes are used to combat cancer and have a massive effect on cancer treatment. According to its specific
structure and mechanical growth, magnetic, thermodynamic,
intrinsic and kinetic properties, metal complexes are used to
produce extremely effective anticancer, DNA and cleaving
medicines (Guerriero et al., 2017). Cisplatin has proven to be
a drug for anticancer, and several researchers have found
other potential metal medicines with increased pharmacological activity since they have high-level neuro, hepato and
nephrotoxic side effects (Bruijnincx & Sadler, 2008; Hill &
Speer, 1982; Rosenberg, 1978). In order to overcome these
problems, scientists concentrated on alternative metal-based
bio-compatible medicines (Adeyemo et al., 2018; Muggia,
2009; Swaminathan et al., 2019).
Ruthenium compounds emerged out to be the most
promising candidate as anticancer agents. Ruthenium based
complexes with a high pharmacological effect are reported
to be target-specific and less toxic (Reedijk, 2008; Song et al.,
2019). Many ruthenium complexes have been investigated
ARTICLE HISTORY
Received 2 April 2020
Accepted 26 May 2020
KEYWORDS
Cytotoxicity; crystal
structures; selenourea; Ru(II)
(g6-p-cymene; docking studies
and reported as anticancer agents; ruthenium-arene complexes find their own significance. The main reasons for the
increasing design of ruthenium-arene based anticancer drugs
are the amphiphilic nature of the arene ruthenium unit, provided by the hydrophobic arene ligand counterbalanced by
the hydrophilic metal center, and the synthetic diversity of
the arene ligand, which is an excellent framework for the
coupling of organic segments for targeted chemotherapy.
Ru-p-cymene complexes like [RuCl2(g6-p-cymene)(pta)]
(RAPTA-C)and [RuCl2(g6-benzene)(pta)] (RAPTA-B) where pta
¼ 1,3,5-triaza-7-phosphaadamantane, have recently attracted
considerable attention due to the very promising in vivo activities on the inhibition of metastasis growth, together with a
high selectivity and low general toxicity. There are also few
reports dealing with RuCl2(g6-p-cymene) type complexes
showing enhanced biological activity on the replacement of
pta with other suitable ligand (Figure 1).The structural backbone of the complexes described in this paper is similar to
that of RAPTA-C; but pta ligand has been replaced by aroyl
selenourea ligand. Moreover, there are a considerable number
of reports on the biological applications of [RuCl2(g6-p-
CONTACT Anandaram Sreekanth
sreekanth@nitt.edu
Department of Chemistry, National Institute of Technology, Tiruchirappalli, Tamil Nadu, India
Supplemental data for this article can be accessed online at https://doi.org/10.1080/07391102.2020.1778531
ß 2020 Informa UK Limited, trading as Taylor & Francis Group
2
M. MUSTHAFA ET AL.
cymene) L] where L is a N or P donor monodentate ligand.
Surprisingly, no such complex with Se donor ligand is explored
for its biological applications.
Ruthenium based complexes are reported as target-specific and less toxic with high pharmacological effects. In particular, NAMI-A, or trans-[RuCl4(DMSO)(Im)]ImH (where Im is
imidazole), is generally nontoxic but is anti-metastatic and
prevents cancer spread. KP1019 or trans-[tetrachlorobis(1Hindazole)ruthenate(III)],
NKP-1339
or
Sodium
trans[tetrachloridobis(1H-indazole)ruthenate(III)], NKP-1339 (IT-139;
KP-1339) is the first-in-class ruthenium-based anticancer
agent in development against solid cancer with limited side
effects. (Bratsos et al., 2007).
In determining the pharmacological properties of complexes, the structure of ligands plays an important key role.
Due to the diverse coordination and biological interventions
of a wide range, including anticancer, antifungal, anti-tuberculosis, insecticide and other diseases, we were aiming at working on aroyl selenourea ligands (Alcolea et al., 2016; Barbosa
et al., 2018; Campos Jr. et al., 2018; Hussain et al., 2014;
Musthafa et al., 2019; Olsen et al., 2016). Selenium is known
primarily for its antioxidant function and its healing, chemopreventive, anti-inflammatory, and anti-virus properties
(Ganther, 1999; Holben & Smith, 1999). Recently, selenoureas
have emerged as free radical scavengers, enzyme inhibitors,
anticancer agents with biological aspects. (Alcolea et al., 2016;
Hussain et al., 2015; Olsen et al., 2016). We describe the in vitro
cytotoxicity of Ru p-cymene complexes with aroyl selenourea
ligands. Our monitoring complexes are identical to the RAPTAB backbone (Coverdale et al., 2019), with the replacement of
pta ligand with aroyl selenourea ligand. In addition, there are
only a few Ru p-cymene complexes for their action against
cancer has been reported and this is the first study evaluated
Figure 1. Structure of a) RAPTA-C and b) [RuCl2(g6-p-cymene)L] (L ¼ sugar
based phosphite analog).
Scheme 1. Synthesis of the aroyl selenourea ligands (L1-L3)
for their biological applications on Ru(II) (g6-p-cymene) complexes which contain aroyl selenourea ligands.
2. Results and discussion
2.1. Synthesis of the ligands and complexes
Benzoyl chloride, or thiophene-2-carbonyl chloride, or furan2-carbonyl chloride are synthesized as aniline replaced aroyl
selenourea ligands (L1-L3), potassium selenocyanate, and
aniline in dry acetone (Scheme 1) (Musthafa et al., 2020).
These aroyl selenourea ligands were allowed to react with
the Ru(II) (g6-p-cymene) precursor [RuCl2 (g6-(p-cymene) (L1L3)])]2. In toluene 2:1 molar ratio and the new general formulation complexes, Ru(II) (g6-p-cymene) (L ¼ aniline substituted aroyl selenourea ligands) (Scheme 2) (Jeyalakshmi
et al., 2016), high yields are obtained. Elemental analysis, single crystal XRD, UV-Visible, FT-IR, 1H, 13C NMR, and mass
spectroscopy experiments are confirming the structures of
the ligands and Ru(II) complexes. The complexes are soluble
in DMSO, DMF, CH3OH, CHCl3, and CH2Cl2.
2.2. Characterization of the ligands and their complexes
Electronic spectrum of ligands (L1–L3) display two strong
absorption bands observed approximately at 260–283 and
309–336 nm, respectively, allocated to p ! p and n ! p
transitions. Electronic spectra of Ru(II) complexes (1-3) were
observed at 267–289 nm and according to the selenourea moiety, LMCT bands appear approximately at 334–382 nm. The
moderately intense band is assigned to d ! d transitions in
the region of 430–453 nm. The FT-IR spectra of the ligands
showed bands in the regions of 3225–3207 cm1 indicate
amide N H, the peak at 3120–3155 cm1 indicate selenourea
N H. The stretching frequencies observed in the range of
1663–1675 cm1 for C ¼ O and 1262–1274 cm1 for C ¼ Se,
respectively (Musthafa et al., 2019, 2020). In the complexes
N H and C ¼ O bands remained unchanged, while the
m(C ¼ Se) (1262–1274 cm1) decreased, indicating that only
selenium (neutral monodentate) is coordinated with the Ru
ion. The FTIR spectra of ligands and complexes were included
in the Supplementary information (SI) (Figures S1–S6). 1H NMR
spectra of all the ligands of aroyl selenourea (L1-L3) showed
that carbonyl and N H attached selenocarbonyl are observed
as singlets and the values appeared in the range of
JOURNAL OF BIOMOLECULAR STRUCTURE AND DYNAMICS
3
Scheme 2. Synthesis of the RuCl2 (g6-p-cymene) complexes (1-3)
Figure 2. Thermal ellipsoid plot of ligand L1.
12.82–13.17 ppm and the peaks at 11.19–11.50 ppm corresponding to selenocarbonyl bound N H. The signals were
observed at 6.55–7.77 ppm indicating all the other aromatic
protons (phenyl, thiophene and furan). The 13C NMR spectra of
the ligands displayed the signals for C ¼ O and C ¼ Se, respectively at 178.39–178.79 and 158.84–168.67 ppm. Signals were
shown to match aromatic carbon in the ligands between 112.0
and 146.1 ppm. The 13C NMR spectra of the complexes showed
no significant shifts. The new peaks observed at
79.54–82.33 ppm represent the confirmation of p-cymene. The
1
H and 13C NMR spectra of the ligands and their metal complexes were shown in the SI (Figures S7–S18) (Jeyalakshmi
et al., 2016). The mass spectra of the ligands and their complexes were also confirming the structure of the compounds
(Shown in ESI Figures S19–S24, Supporting Information).
2.3. X-ray crystallographic analysis
The ligand L1 and complex 3 molecular structures were confirmed by single-crystal X-ray diffraction studies as shown in
Figures 2–4, respectively. Crystal and selected inter-atomic
bond lengths and bond angles are summarized in Tables
1–3. The ligand L1 has shown monoclinic crystal system and
space group P121/c1, and the complex 3 showed monoclinic
crystal system and space group P121/n1. The crystal structures of the ligand and its complex were observed that there
is a correlation between selenocarbonyl and carbonyl oxygen
with intra-molecular hydrogen. The furan ring was oriented
in the structures of complex 3 in two opposite directions.
Slightly elongated thermal parameters of the furan groups
(C18–C21, S2) indicate that a possible disorder, which was
successfully modeled between two positions.
2.4. DNA binding studies
Understanding the binding nature of synthesized complexes
(1-3) towards DNA is a significant step in the development
of the anticancer drug, synthetic restriction enzymes and so
forth (Mahadevan & Palaniandavar, 1998; Nikolic et al., 2015;
Ramakrishnan & Palaniandavar, 2008). Consequently, the
4
M. MUSTHAFA ET AL.
Figure 3. Thermal ellipsoid plot of complex 3 with atomic labeling.
Figure 4. Crystal packing of ligand L1 and complex 3.
ability and the trend for the binding of complexes (1-3) to
CT-DNA were examined with various techniques.
2.4.1. Electronic absorption spectral titration
Electronic spectral experiments have tested the association
of complexes (1-3) with CT-DNA. Complexes (1-3) exhibited
a band at 287–320 nm which was used for further studies
(Balakrishnan et al., 2019; Jeyalakshmi et al., 2017). It is
understood that an intercalated compound bound to DNA
demonstrates a hypochromism with a bathochromic
difference in the rate of absorption due to the combination of the chromophore with the base DNA pair. The
observed spectral changes were plotted by taking [DNA]/
(eaef) in Y-axis and [DNA] in X-axis, according to the
equation [DNA]/(eaef) ¼ [DNA]/(ebef) þ 1/Kb (ebef)
where [DNA] is the concentration of DNA in base pairs, ea
is the apparent extinction coefficient value found by calculating A (observed)/[complex], ef is the extinction coefficient for the free compound, and eb is the extinction
coefficient for the compound in the fully bound form
(Rohini, Haribabu, et al., 2018). The intrinsic binding
JOURNAL OF BIOMOLECULAR STRUCTURE AND DYNAMICS
5
Table 1. Crystallographic data and refinement parameters for ligand L1 and complex 3.
Identification code
L1
3
Empirical formula
Formula weight (g/mol)
Temperature (K)
Wavelength (Å)
Crystal system
Space group
Unit cell dimensions
a (Å)
b(Å)
c (Å)
a ( )
C14H12N2OSe
303.22
100(2)
0.71073
Monoclinic
P121/c1
C22H24Cl2N2O2RuSe
599.36
100(2)
0.71073
Monoclinic
P121/n1
13.1366(15)
4.8877(6)
19.895(2)
90
14.3983(5)
9.4258(5)
16.8343(9)
90
b ( )
c ( )
103.284(4)
90
90.7652(15)
90
Volume (Å3)
1243.2(3)
2284.47(19)
4
4
Z
Density (calculated) Mg/m3
Absorption coefficient (mm–1)
F(000)
Crystal size (mm3)
Theta range for data collection ( )
Index ranges
1.620
3.008
608
0.040 0.060 0.220
2.33 to 27.22
16 h 16,
6 k 6,
25 l 25
15,894
2760
0.0841
99.4
Multi-Scan
0.8890 and 0.5570
Full-matrix least-squares on F2
2760/0/163
1.159
R1 ¼ 0.0471, wR2 ¼ 0.0991
R1 ¼ 0.0871, wR2 ¼ 0.1172
n/a
0.863 and –0.937
Reflections collected
Independent reflections [R(int)]
Completeness to theta
Absorption correction
Max. and min. transmission
Refinement method
Data/restraints/parameters
Goodness-of-fit on F2
Final R indices [I > 2sigma(I)]
R indices (all data)
Extinction coefficient
Largest diff. peak and hole (e.Å–3)
1.743
2.535
1192
0.020 0.030 0.100
2.42 to 27.10
–18 h 18,
12 k 12,
18 l 21
22,874
5021
0.0940
99.7
Multi-Scan
0.9510 and 0.7860
Full-matrix least-squares on F2
5021/64/302
1.020
R1 ¼ 0.0411, wR2 ¼ 0.0717
R1 ¼ 0.0790, wR2 ¼ 0.0866
n/a
0.743 and –0.862
Table 2. Selected bond lengths (Å) and bond angles ( ) for ligand L1.
Table 3. Selected bond lengths (Å) and bond angles ( ) for complex 3.
Bond lengths (Å)
Bond lengths (Å)
Ru1-C1
Ru1-C3
Ru1-C5
Ru1-Cl1
Ru1-Se1
Se1-C17
C18-O1
Bond angles ( )
C1-Ru1-Se1
C3-Ru1-Se1
C5-Ru1-Se1
Cl1-Ru1-Se1
N1-C17-Se1
Se1-C8
C1-N1
C8-N1
Bond angles ( )
O1-C1-N1
N1-C1-C2
N2-C8-Se1
C14-C9-N2
C1-N1-C8
1.829(5)
1.390(6)
1.403(6)
C1-O1
C8-N2
C9-N2
1.224(6)
1.325(6)
1.407(7)
122.3(5)
116.2(4)
128.6(4)
126.5(5)
127.2(4)
O1-C1-C2
N2-C8-N1
N1-C8-Se1
C10-C9-N2
C8-N2-C9
121.4(5)
114.9(4)
116.5(4)
113.9(5)
133.6(4)
constant Kb was calculated from the ratio of the slope and
the intercept (Aneesrahman et al., 2018). In all the cases,
similar trends were observed as can be seen from Figures
5(a) and S25 (Supporting Information). Among the complexes, complex 1 exhibits a maximum shift. Figure 5(b)
shows the magnitudes of binding constants (Kb) and the
values are tabulated in Table 4. The Kb values were found
to be in the range of 5.718 105 – 3.991 105 M1. The
binding energy of complex 1 is more than that of complex 2 and 3 comparatively. Binding constant values of
complex 1 when studied by molecular docking (1BNA) is
more than the other 2 complexes (2 and 3) (Pursuwani
et al., 2020).
2.188(5)
2.178(4)
2.199(5)
2.431(3)
2.5275(13)
1.858(5)
1.219(5)
Ru1-C2
Ru1-C4
Ru1-C6
Ru1-Cl2
C11-N1
C18-N2
2.148(5)
2.225(5)
2.143(5)
2.428(3)
1.449(5)
1.376(6)
95.30(14)
161.84(14)
99.80(13)
91.84(12)
121.4(3)
C2-Ru1-Se1
C4-Ru1-Se1
C6-Ru1-Se1
Cl2-Ru1-Se1
N2-C17-Se1
129.76(16)
136.10(15)
82.42(12)
91.33(14)
120.0(3)
2.4.2. Fluorescence spectroscopic studies
Fluorescence spectroscopy was used for further confirmation
of the binding modes of the complexes (1-3) to DNA. Since
all the complexes (1-3) did not show any fluorescence in
solution, the Ethidium bromide was used as a fluorescence
probe (Rohini, Ramaiahet al., 2018). In the Tris buffer solution
at room temperature, EB shows a weak luminescence, but in
the presence of CT-DNA, the rapid intercalation of DNA base
pairs has shown strong luminescence. If the complex under
investigation has the intercalation abilities, the intensity of
fluorescence starts to decrease as it replaces the EB from
6
M. MUSTHAFA ET AL.
Figure 5. (a) Complex 1 absorption spectra in the Tris-HCl buffer with CT-DNA addition, [DNA] ¼ 0-40 lM, [complex] ¼ 25 lM.The arrow indicates that as the CTDNA concentration increases the absorption intensity decreases. (b) The plot of titrating complexes with CT-DNA [DNA]/(ea ef ) versus [DNA]. (c) In the presence
of complex 1 fluorescence curves EB bound with DNA. [DNA] ¼ 5 mM, [EB] ¼ 5 mM and [complex] ¼ 0–50 mM. (d) The fluorescence titrations of the complexes with
CT-DNA are from Stern-Volmer equation.
Table 4. Binding constant of DNA (Kb), Stern-volumer constant (Kq) and apparent binding constant (Kapp) values of complexes (1-3).
Complex
1
2
3
Kb (M–1)
DG (kJ mol1)
Kq (M–1)
Kapp (M–1)
5.718 10 ± 0.09
4.811 105 ± 0.06
3.991 105 ± 0.03
–27.32
–26.89
–26.42
1.956 10 ± 0.03
1.845 104 ± 0.04
1.883 104 ± 0.08
1.310 106 ± 0.05
1.210 106 ± 0.03
1.110 106 ± 0.02
5
DNA, the EB displacement assay, thereby providing indirect
proof for the DNA binding mode. In addition to the CT-DNAEB solution with complexes (1-3) (0–50 lM), a decrease in
fluorescence intensity was observed up to 59.4, 55.4, and
54.3% with a small redshift (8, 3, and 2 nm) (Figure 4(c) and
S26, Supporting Information). The quantitative assessment of
the interaction of the complexes with CT DNA was given by
Stern-Volmer equation, Fo/F ¼ 1 þ Kq [Q] where Fo and F are
the fluorescence intensities in the absence and presence of
complex respectively, Kq is a linear Stern-Volmer quenching
constant, and [Q] is the concentration of complex. The slope
of the plot of Fo/F versus [Q] gave Kq (Figure 5(c,d)). The
apparent DNA binding constant (Kapp) values were calculated
by using the equation KEB [EB] ¼ Kapp [complex], where
[complex] is the complex concentration at 50% reduction in
4
the fluorescence intensity of EB (Muralisankar et al., 2016).
The Kq and Kapp quenching constant is 1 > 2 > 3, as
described in Table 4. The free energies of complexes 1, 2,
and 3 were evaluated as negative values and are –27.32,
26.89, and –26.42 kJ mol1. These values indicate that
these complexes with DNA interaction spontaneity.
2.5. Protein interaction studies
2.5.1. UV-Visible absorption spectra
In order to determine the quenching mechanism, the BSA
UV-Visible absorption spectrum in the presence and absence
of complexes (1-3) were studied. Quenching usually occurs
either by dynamic or static mode. Dynamic quenching is a
process in which the fluorophore and the quencher come
JOURNAL OF BIOMOLECULAR STRUCTURE AND DYNAMICS
7
Figure 6. (a) BSA (10 lM) and complexes (1-3) (4 lM) BSA absorption spectra, (b) In the absence and presence of complex 1 fluorescence quenching curves of
BSA. [BSA] ¼ 1 mM and [complex] ¼ 0–20 mM. (c) The Stern-Volmer diagram of the titrations of fluorescent complexes to BSA. (d) Fluorescence titration of complexes with BSA from Scatchard equation.
into contact during the transient existence in the excited
state. On the other hand, static quenching refers to the formation of a fluorophore-quencher complex in the ground
state. UV-Visible absorption spectroscopy is the tool to determine the type of quenching involved. The addition of the
complexes to BSA leads to an increase in BSA absorption
intensity without affecting the position of the absorption
band (Figure 6(a)). It showed the existence of static interaction between BSA and the complexes (1-3). The complexes
(1-3) indicated a static type of quenching mechanism as
reported (Krishnamoorthy et al., 2012; Lakowicz & Weber,
1973; Ramachandran et al., 2012; Sathyadevi et al., 2012).
2.5.2. Fluorescence spectra
Protein fluorescent properties are largely attributable to
residual
tryptophan,
tyrosine
and
phenylalanine.
Fluorescence changes reflect conformational changes in the
protein (Burstein et al., 1973; Mukhopadhyay et al., 2015;
Selvakumaran et al., 2014). The interactions of BSA (bovine
serum albumin) with complexes (1–3) were studied using
fluorescent spectroscopy. BSA solution (1 lM) with complexes
(1–3) (0–20 lM) and changes in fluorescence spectra in
290–500 nm (kex 280 nm, Figure 6(b) and S26, Supporting
Information) were reported. A fluorescence intensity reduction of BSA was due to the addition complexes (1–3) (74.6%,
2 nm, complex 1; 75.2%, 1 nm, complex 2; 69.5%, 1 nm, complex 3, respectively).
The quenching of BSA during the addition of complexes
(1-3) indicates the interaction of the molecules and the consequent conformational changes. Figure 6(c,d) have measured the binding constant and number of binding sites.
Table 5 shows the results of Kq, Kb, and n. The Kq values of
complexes (1–3) showed a higher binding potential with
BSA in complex 2. The binding sequence observed is
1 > 2 > 3. From the Scatchard equation, n values obtained
for all molecules were 1, which suggests that the number
of binding sites of BSA for each molecule is one. The Kb values also reflect the higher binding potential of complex 1,
compared with BSA complexes 2 and 3. The free energies of
complexes 1, 2, and 3 were evaluated as negative values
and are –27.42, 26.96, and 25.70 kJ mol1. These values
indicate complexes with BSA interaction spontaneity.
8
M. MUSTHAFA ET AL.
2.6. Frontier molecular analysis (FMO) and molecular
electrostatic surfaces (MESP)
2.6.1. FMO analysis
FMO helps to identify electronic transitions and kinetic stability, electric and optical characteristics (Bhat et al., 2019; Li
et al., 2013; Konakanchi et al., 2019). FMOs were determined
by using BL3YP; LANL2DZ theory rate of all three complexes
(1–3) as shown in Figure 7. The HOMO-LUMO energy gap of
complexes (1–3) are 3.03, 3.02, 2.98 eV, respectively (Table
S1, Supporting Information). The small difference in the
HOMO–LUMO energies of the complexes depicts their similar
reactivity nature. In order to assess the important chemical
reactivity descriptors such as softness, hardness, electro
negativity, chemical potential, and electrostatic and ionization energy, this HOMO–LUMO energy gap was investigated.
Chemical hardness (g) and softness is basically the measurement of chemical reactivity which stabilizes the system
and chemical potential l by applying a charge which gives
an idea about the transfer of charge from higher to lower
Table 5. Constant Protein Binding (Kb), Constant Stern-Volumer (Kq) and number of binding sites (n) values of complexes (1–3).
Complex
1
2
3
Kb (M–1)
DG (kJ mol1)
Kq (M–1)
n
5.966 10 ± 0.04
4.956 104 ± 0.06
2.989 104 ± 0.07
–27.42
–26.96
–25.70
7.864 104 ± 0.09
4.988 104 ± 0.04
3.711 104 ± 0.07
0.945
0.923
0.977
4
potential (Figure 7). HOMO–LUMO energy of the complexes
(1–3) are simulated by using theory level BL3YP/LANL2DZ
(Bhat Lone, Ali, et al.,2018,; Bhat, Lone, & Srivastava, 2018).
Electro negativity (v) represents the tendency to attract electrons. These properties have been defined as follows:
g ¼ (I – A)/2 l ¼ – (I –A)/2 v ¼ (I þ A)/2
In which I and A represents the ionizing potential and electron affinity of the complexes obtained by HOMO and LUMO
energies in the form of I¼ –EHOMO and A ¼ –ELUMO by Janak
theorem and Perdew et al. With the use of these equations
these descriptors were calculated. It has been observed that
the hardness (g) is directly associated with stability is 1.76, 1.66
1.76 e.V for complexes (1–3), respectively. The chemical potential l is primarily the tendency of the electrons to escape from
an equilibrium system and it was found to be –3.36, –3.64, and
–3.52 for complexes (1–3), respectively.
The global index of electrophilicity (x) is related to the
chemical hardness and chemical potential and initially developed by Parr et al. This represents the measure of energy stabilization achieved when an electronic charge from the
environment is obtained from the system and is given by the
x ¼ l2/g. For complexes (1–3), corresponding values are 6.39,
7.98, 7.04 e.V. All of this was measured using BL3YP/LANL2DZ
basis set for the target complexes and is shown in Table S1
(Supporting Information). From Table S1 (Supporting
Information), it is clear that the energy gap of HOMO–LUMO
Figure 7. The energy level complexes (1-3) of HOMO and LUMO of complexes simulated by DFT; theory level BL3YP/LANL2DZ.
JOURNAL OF BIOMOLECULAR STRUCTURE AND DYNAMICS
9
Figure 8. The molecular electrostatic surfaces of complexes (1–3).
Table 6. Molecular docking parameters (B-DNA) of complexes (1-3).
Complex
1
2
3
No. of
rotational bonds
9
9
9
Binding constant
of DNA (Kb)
5.718 104 ± 0.09
4.811 104 ± 0.06
3.991 104 ± 0.03
Best binding
energy (kcal/mol)
–4.15
–4.00
–3.04
Nucleotide residues
involved in the interaction
with complexes
DA 17, DA 18
DT 7, DA 18
DG 4, DA 5, DA 17
and reactivity descriptors like hardness, potential and global
electrophilicity of each three complexes is more or less similar,
suggesting their almost similar behavior in the study of the
interaction between enzymes and proteins.
molecular docking process using AutoDock 4.2 molecular
docking software and were displayed with Maestro
€dinger software (Gopalakrishnan et al., 2017; Konakanchi
Schro
et al., 2018; Lone et al., 2018; Morris et al., 2009).
2.6.2. MESP analysis
2.7.1. Molecular docking with DNA
This is important to predict measures of molecular reactions
(Costa et al., 2017; Lone et al., 2018; Ramaiah, Srishailam,
et al., 2019). The molecular reactivity to charged reactants is
measured and hydrogen binding interactions are shown. The
molecular electrostatic surfaces show fundamental properties, such as electron density scale, shape and variance, while
correlating them with dipole moment, partial charges, electro
negativity and chemical reactivity in the molecule (Ramaiah
et al., 2020). MESP for analysis of drug-receptor and enzymesubstrate interactions together with H-bonding interactions
has been studied by the computational organic chemists. A
contrasting view of the molecular electrostatic maps is
shown in Figure 8. Complexes (1–3) MESP determined with
the basis set BL3YP; LANL2DZ has a similar or more similar
environment. The photo representation of electrostatic
potential in the rainbow color scheme is between
– 6.138 e2, þ 6.138 e2, –6.315 e2, and þ 6.315 e2
between –6.018 e2 and þ6.108 e2, for complexes (1-3),
respectively. The brightest red region represents the high
electron density region (negative potential), and the darkest
blue region shows the weak electron density region (positive
potential). The experiments carried out by MESPs have shown
the three complexes areas most vulnerable to high electron
density electrophilic attack involving carbonyl oxygen.
Molecular docking is an important in-silico computational tool
for the rational design of new chemotherapeutic drugs, which
predicts non-covalent interaction between the drug molecules
and the nucleic acids of DNA. Confirmations of docked complexes were analyzed in terms of energy (kcal/mol). From the
docking scores, the binding energy of the complexes were calculated and details are shown in Table 6. Molecular docking
experiment reveals that the docked complexes fit into the
DNA comfortably, without disrupting the double-helical structure of DNA, resulting in the binding energy between –3.04
and –4.15 kcal/mol. Nucleotide residues involved in the interaction with complexes (1-3) is DA 17, DA 18; DT 7, DA 18 and
DG 4, DA 5, DA 17, respectively. Complex 1 showed higher
binding energy of –4.15 kcal/mol and binding constant of DNA
(Kb) of 5.718 104 ± 0.09 when compared to complexes 2 and
3. The molecular docking model with DNA (PDB ID: 1BNA) of
complex 1 is shown in Figure 9.
2.7. Molecular docking study
DNA (PDB ID: 1BNA), BSA (PDB ID: 3V03) and human aromatase enzyme (PDB ID: 3EQM) were subjected to the
2.7.2. Molecular docking with BSA
The molecular docking technique is an attractive scaffold to
understand the ligand-protein interactions which can substantiate the experimental results. Conformations of docked
complexes were analyzed in terms of binding energy and
hydrophobic interaction between complexes and BSA. The
molecular docking experiment reveals that the docked complexes fit into the BSA by Van der Waals interaction. The
binding energy of the individual complexes has been tabulated and the highest binding energy for each of the
10
M. MUSTHAFA ET AL.
Figure 9. Molecular docking model of complex 1 with DNA (PDB ID: 1BNA).
Table 7. Molecular docking parameters of complexes (1–3) with BSA (PDB ID: 3V03).
No. of
Rotational bonds
Number of binding
sites (n)
Binding constant of
BSA (Kb)
Best binding energy
(kcal/mol)
1
9
0.945
5.966 104 ± 0.04
–12.91
2
9
0.923
4.956 104 ± 0.06
–10.48
3
9
0.977
2.989 104 ± 0.07
–3.91
Complex
complexes has shown in Table 7. Complex 1 has the highest
binding energy and the value of –12.91 kcal/mol and binding
constant of BSA (Kb) of 5.966 104 ± 0.04 when compared to
complexes 2 and 3. Interaction of complex 1 with BSA (PDB
ID: 3V03) molecular docked model is shown in Figure 10.
The binding force in terms of Van der Waals interactions of
complex 1 is GLU A:29, LYS A:439, THR A:190, LYS A:294, VAL
A:342, ASP A:450, ARG A: A217, complex 2 is HIS A:145, LEU
A:189 and complex 3 is ILE A:455, ARG A:458. Type of binding interaction of complex 1 is pi-cation: ARG A:194 mixed
pi/alkyl hydrophobic: TYR A:451, CYS A:447: complex 2 is pication: ARG A:458, GLU A:424 Pi-alkyl: LEU A:454, ILE A:455,
ALA A:193 and complex 3 is mixed pi/alkyl hydrophobic: ALA
A:193, LEU A:189, HIS A:145 pi-cation: LYS A:431, LEU A:454.
2.7.3. Molecular docking with the human aromatase enzyme
All the complexes (1–3) were subjected to molecular docking
with human aromatase enzyme using the AutoDock Tools
Binding forces
Van der Waals: GLU A:29,
LYS A:439, THR A:190,
LYS A:294, VAL A:342,
ASP A:450, ARG A: A217
Van der Waals: HIS A:145,
LEU A:189
Van der Waals: ILE A:455,
ARG A:458
Type of binding
interaction
Pi-cation: ARG A:194
Mixed pi/alkyl
hydrophobic: TYR
A:451, CYS A:447
Pi-Cation: ARG A:458, GLU
A:424Pi-Alkyl: LEU
A:454, ILE A:455,
ALA A:193
Mixed pi/alkyl
hydrophobic: ALA
A:193, LEU A:189, HIS
A:145
Pi-cation: LYS A:431,
LEU A:454
(ADT) version 1.5.6 and AutoDock version 4.2 molecular
docking software and were displayed with Maestro
€dinger software. The X-ray crystallographic structure of
Schro
the human aromatase enzyme (PDB ID: 3EQM) was retrieved
from Protein Data Bank. Docked ligand conformation was
analyzed in terms of energy, hydrogen bonding, and hydrophobic interaction between the ligand and human aromatase
enzyme. The binding energy of the individual complexes has
been tabulated and the highest binding energy for each of
the complexes has shown in Table 8. Complex 1 has the
highest binding energy of -6.48 kcal/mol and inhibition constant (Ki) of 38.19 when compared to complexes 2 and 3.
The binding force in terms of Van der Waals interactions of
complex 1 is ASN A:571, GLU A:489, GLY A:488, PRO A:666,
ASN A:631, ASP A:644, GLY A:490, VAL A:495, ASP A:626, LYS
A:517,complex 2 is ASP A:626, PHE A:492, GLY A:490, GLU
A:489, ALA A:491, ASN A:571 and complex 3 is GLY A:488,
GLY A:490, ASN A:631, LYS A:517, LEU A:633, ASP A:644.
Types of binding interaction seen in complexes (1–3) are pipi interactions, hydrogen bond, pi-cation interaction, pi-alkyl
JOURNAL OF BIOMOLECULAR STRUCTURE AND DYNAMICS
11
Figure 10. Molecular docking model of complex 1 with BSA (PDB ID: 3V03).
Table 8. Molecular docking parameters of complexes (1-3) against human aromatase enzyme (PDB ID: 3EQM).
No. of
Rotational bonds
9
Best binding energy
(kcal/mol)
–6.48
Inhibition
constant (Ki) lM
38.19
2
9
–2.11
15.16
3
9
–1.93
28.33
Complex
1
Binding forces
Van der waals: ASN A:571, GLU
A:489, GLY A:488, PRO A:666,
ASN A:631, ASP A:644, GLY
A:490, VAL A:495, ASP A:626,
LYS A:517
Van der waals: ASP A:626, PHE
A:492, GLY A:490, GLU A:489,
ALA A:491, ASN A:571
Van der waals: GLY A:488, GLY
A:490, ASN A:631, LYS A:517,
LEU A:633, ASP A:644
Type of binding interaction
Pi-Pi interactions: LEU
A:633, ARG A:630
Hydrogen bonds:
ALA A:491
Pi-cation interactions: ARG
A:630
Pi-alkyl: PRO A:666
Mixed pi/alkyl hydrophobic:
ARG A:630, PHE A:492,
ALA A:491, VAL A:495
Figure 11. Molecular docking model of complex 1 with human aromatase enzyme (PDB ID: 3EQM).
interaction and mixed pi/alkyl hydrophobic interaction.
Complex 1 interaction with BSA (PDB ID: 3V03) molecular
docked model is shown in Figure 11.
Based on the docking result of DNA, BSA interaction and
in vitro experimental studies (Harshitharaj et al., 2016; Kumar
et al., 2011), the target molecules were chosen to
12
M. MUSTHAFA ET AL.
demonstrate the effects of the docking parameters (Tables
6–8), and the binding positions were shown in Figures 9–11
and S27–S32 (Supporting Information)). The docking finding
showed the higher bonding energy in complex 1 for DNA
(–4.65 kcal/mol), BSA (–12.91 kcal/mol), and human aromatase
enzyme (–6.48 kcal/mol) than complexes 2 and 3 suggesting
enhanced biological activity.
2.8. Cytotoxicity study of complexes (1–3) against HeLa
S3, A549, and IMR90 cells
Cytotoxic activity of complexes (1-3) were assessed against
human cancer HeLa S3, A549, and normal IMR90 cells by
MTT assay (Balachandran et al., 2018; Konakanchi et al., 2018;
Ramaiah et al., 2019). The cytotoxicity results revealed that
complexes 1 and 2 showed promising cytotoxic activity
against HeLa S3 cell with 50% inhibition of cell proliferation
was observed at 24 and 26 mM, respectively, as summarized
in Table 9 and Figure 12. At the same time, complexes 1 and
2 showed moderate cytotoxic activity against A549 cells with
50% inhibition of cell proliferation was observed at 64 and
69 mM, respectively. Moreover, complex 3 showed weak and
least cytotoxic activity against both tested HeLa S3 and A549
cells. The cytotoxicity study is then carried out with complexes (1-3) against normal IMR90 cells (Table 9 and Figure
S33 in the Supporting Information), resulting no toxicity was
observed up to 100 mM, suggest that complexes 1 and 2 as a
promising anticancer agent against HeLa S3 cells than A549
cells with less toxicity. The Ru-p-cymene complexes (1–3)
showed higher activity than the recently reported ruthenium
complexes (Moideen et al., 2020). In addition, the cytotoxic
activity also compared with well-known anticancer
agent cisplatin.
Table 9. IC50 values of complexes (1-3) against A549, HeLa S3, and IMR-90
cell lines.
Complex
A549 (mM)
HeLa S3 (mM)
IMR-90 (mM)
1
2
3
Cisplatin
64
69
83
23
24
26
56
26
>100
>100
>100
–
2.9. Fluorescence microscopic study of complexes 1
and 2
Morphological changes of HeLa S3 and A549 cells were
assessed by a fluorescence microscope in the presence of
complexes 1 and 2 using AO (acridine orange, 200 mM) and
EB (ethidium bromide, 100 mM) (Jeyalakshmi et al., 2019). AO
is an indicator of live cells and EB is an indicator of dead
cells. HeLa S3 and A549 cells were treated with complex 1
(50 mM, 100 mM) and complex 2 (50 mM, 100 mM) for 24 h and
then co-stained with AO/EB for 15 min at dark condition. The
images were taken immediately at the fluorescence microscope (Biorevo, BZ-9000, Keyence). The results revealed that
the dramatic morphological changes were observed when
the exposure of complexes 1 and 2 in HeLa S3 and A549
cells is summarized in Figures 13 and 14. We speculated that
complexes 1 and 2 induce apoptosis mediated cell death in
cancer cells.
3. Conclusion
Spectroscopic techniques like FTIR, UV-Visible, 1H, 13C NMR
and mass spectra were used to characterize and confirm the
structure of aniline substituted aroyl selenourea derivatives.
The molecular structures were evaluated using single-crystal
X-ray diffraction. Ligand L1 and complex 3 belongs to monoclinic crystal systems, with space groups P121/c1 and P121/
n1, containing four and two molecules per unit cell, respectively. In vitro anticancer activity of the complexes 1 and 2
have shown promising activity against HeLa S3 with IC50 values of 24 and 26 mM, respectively compared with standard
drug cisplatin with IC50 value of 24 mM. Finally, these encouraging results are helpful in the in vivo biological applications
in future endeavors.
4. Experimental
4.1. Synthesis of aniline substituted aroyl selenourea
ligands (L1-L3)
The ligands (L1-L3) were prepared by the following method.
A solution of benzoyl chloride (0.6 mL, 5 mmol) or thiophene2-carbonyl chloride (0.6 mL, 5 mmol) or furan -2-carbonyl
Figure 12. Cytotoxic study of complexes (1-3) against HeLa S3 and A549 cells. Three independent experiments were used to measure the results of mean ± SD.
JOURNAL OF BIOMOLECULAR STRUCTURE AND DYNAMICS
13
Figure 13. Cancer cell death and morphological changes of HeLa S3 cells were examined by fluorescence microscope (Biorevo, BZ-9000, Keyence, 20) using fluorescence dyes such as AO (acridine orange, 200 mM) and EB (ethidium bromide, 100 mM) after the treatment of complexes 1 and 2 for 24 h.
Figure 14. Cancer cell death and morphological changes of A549 cells were examined by fluorescence microscope (Biorevo, BZ-9000, Keyence, 20) using fluorescence dyes such as AO (acridine orange, 200 mM) and EB (ethidium bromide, 100 mM) after the treatment of complexes 1 and 2 for 24 h.
chloride (0.5 mL, 5 mmol) in dry acetone (25 mL) was added
dropwise to potassium selenocyanate (0.485 g, 5 mmol) in
dry acetone (25 mL). The reaction mixture was stirred for one
hour at room temperature. After cooling, aniline (1 g,
5 mmol) dissolved in acetone (30 mL) was added to it dropwise, and the resulting mixture was refluxed for 2 h at 65 C.
14
M. MUSTHAFA ET AL.
The reaction mixture was poured into hydrochloric acid
(0.1 N, 200 mL) and the resulting pale yellow/brown substance was filtered off. Recrystallisation purified the solid
product from a chloroform/ethanol mixture (1/2).
4.1.1 N-(phenylcarbamoselenoyl)benzamide (L1)
Yield: 1.25 g, 74%. Yellow solid, m.p.: 154 C. Anal. Calc. for
C14H12N2OSe (%): C, 55.46; H, 3.99; N, 9.24. Found: C, 55.38;
H, 4.05; N, 9.20. UV–Vis (DMF): kmax, nm 260, 309. FT-IR: V,
cm1 3344, 3260 (N H), 3027 (¼C H), 1667 (C ¼ O), 1262
(C ¼ Se). 1H NMR (500 MHz, CDCl3): d, ppm 12.98 (s, 1H, NH),
11.80 (s, 1H, NH), 8.00-7.98 (d, J ¼ 4 Hz, 2H), 7.69-7.68 (d,
J ¼ 4 Hz, 3H), 7.58-7.56 (d, J ¼ 8 Hz, 2H), 7.55-7.47 (t, J ¼ 6 Hz,
2H), 7.45–7.34 (m, 1H). 13C NMR (125 MHz, CDCl3): d, ppm
180.96 (C ¼ Se), 168.61 (C ¼ O), 139.47, 133.71, 132.43, 129.26,
129.18, 128.92, 127.39, 125.62. LC-MS ¼ 303.02 [M – H]–.
4.1.2
N-(phenylcarbamoselenoyl)thiophene-2-carboxamide (L2)
Yield: 1.30 g, 72%. Yellow solid, m.p.: 160 C. Anal. Calc. for
C21H16N2OSeS (%): C, 46.61; H, 3.26; N, 9.06; S, 10.37. Found:
C, 46.51; H, 3.29; N, 9.04; S, 10.12. UV-Vis (DMF): kmax, nm
276, 314. FT-IR: V, cm1 3389, 3270 (N H), 3069 (¼C H),
1668 (C ¼ O), 1269 (C ¼ Se). 1H NMR (500 MHz, CDCl3): d,
ppm 11.80 (s, 1H, NH), 9.14 (s, 1H, NH), 7.74–7.72 (d, J ¼ 4 Hz,
1H), 7.62–7.60 (d, J ¼ 4 Hz, 1H), 7.48–7.46 (d, J ¼ 8 Hz, 2H),
7.43–7.42 (t, J ¼ 6 Hz, 2H), 7.39–7.21 (m, 2H). 13C NMR
(125 MHz, CDCl3): d, ppm 179.72 (C ¼ Se), 161.11 (C ¼ O),
138.43, 135.62, 134.73, 131.04, 129.06, 128.67, 127.65, 124.72.
LC-MS ¼ 308.96 [M – H]–.
4.1.3 N-(phenylcarbamoselenoyl)furan-2-carboxamide (L3)
Yield: 1.06 g, 71%. Pale yellow solid, m.p.: 145 C. Anal. Calc.
for C21H16N2O2Se (%): C, 49.01; H, 3.47; N, 9.52. Found: C,
49.82; H, 3.53; N, 9.56; UV–Vis (DMF): kmax, nm 283, 336. FTIR: V, cm1 3275, 3118 (N H), 3045 (¼C H), 1670 (C ¼ O),
1279 (C ¼ Se). 1H NMR (500 MHz, CDCl3): d, ppm 12.66 (s, 1H,
NH), 9.48 (s, 1H, NH), 7.63–7.62 (d, J ¼ 4 Hz, 1H), 7.58–7.38 (d,
J ¼ 4 Hz, 1H), 7.36–7.35 (d, J ¼ 8 Hz, 2H), 7.28–7.27 (t, J ¼ 6 Hz,
2H), 7.25–6.58 (m, 2H). 13C NMR (125 MHz, CDCl3): d, ppm
179.72 (C ¼ Se), 156.61 (C ¼ O), 146.73, 144.70, 138.47, 129.02,
127.58, 124.69, 119.35, 113.54. LC-MS ¼ 293.05 [M – H]–.
4.2. Synthesis of complexes
cymene phenyl-H), 2.88–2.81 (m, 1H, p-cymene CH(CH3)2),
2.14 (s, 3H, p-cymene CH3), 1.82–1.75 (d, J ¼ 10.0 Hz, 6H, pcymene CH(CH3)2). 13C NMR (125 MHz, CDCl3): d, ppm 178.39
(C ¼ Se), 168.67 (C ¼ O), 135.6, 133.5, 133.5, 131.0, 130.9,
129.5, 128.8, 128.4, 128.1, 85.5 (benzene carbon). LC-MS ¼
611.41 [M] þ.
4.2.2 [Ru(II)(g6-p-cymene) L2] (2)
[RuCl2(g6- p-cymene)]2 (0.22 g, 0.44 mmol) and L2 (0.317 g,
0.88 mmol) were used. Yield: 83%. Yellowish orange solid,
m.p.: 210 C. Anal. Calc. for C27H22Cl2N2O2RuSe: C, 42.93; H,
3.93; N, 4.55; S, 5.21. Found: C, 42.52; H, 3.35; N, 4.44; S, 5.15.
UV-Vis (DMF): kmax, nm 275, 347, 436. FT-IR: V, cm1 3219,
3155 (N–H), 3155 (¼C–H), 1657 (C ¼ O), 1274 (C ¼ Se). 1H
NMR (500 MHz, CDCl3): d, ppm 12.92 (s, 1H, NH), 11.32 (s, 1H,
NH), 8.64 (s, 1H), 8.60 (d, J ¼ 8.7 Hz, 2H), 8.01 (s, 1H), 7.97 (dd,
J ¼ 14.0, 7.5 Hz, 4H), 7.65 (t, J ¼ 7.4 Hz, 2H), 7.43 (s, 2H), 7.14
(s, 1H), 5.34–5.27 (d, J ¼ 10.0 Hz, 2H, p-cymene phenyl-H),
5.26-5.25 (d, J ¼ 5.0 Hz, 2H, p-cymene phenyl-H), 2.95–2.92
(m, 1H, p-cymene CH(CH3)2), 2.88 (s, 3H, p-cymene CH3),
2.23-1.69 (d, J ¼ 10.0 Hz, 6H, p-cymene CH(CH3)2). 13C NMR
(125 MHz, CDCl3): d, ppm 178.59 (C ¼ Se), 163.52 (C ¼ O),
137.22, 136.42, 135.50, 134.99, 129.37, 128.61, 126.43 (aromatic carbons), 102.83, 83.22, 82.39, 81.33, 80.57 (aromatic
carbons of p-cymene), 30.55, 22.30, 18.41 (aliphatic carbons).
LC-MS ¼ 616.42 [M] þ.
4.2.3 [Ru(II)(g6-p-cymene) L3] (3)
[RuCl2 (g6- p-cymene)]2 (0.22 g, 0.44 mmol) and L3 (0.331 g,
0.88 mmol) were used. Yield: 75%. Orange solid, m.p.: 205 C.
Anal. Calc. for C27H22Cl2N2ORuSeS: C, 44.09; H, 4.04; N, 4.67.
Found: C, 43.09; H, 4.08; N, 4.39. UV–Vis (DMF): kmax, nm 287,
382, 453. FT-IR: V, cm1 3225, 3149 (N–H), 3040 (¼C–H), 1675
(C ¼ O), 1268 (C ¼ Se). 1H NMR (500 MHz, CDCl3): d, ppm
12.82 (s, 1H, NH), 11.19 (s, 1H, NH), 5.36–5.23 (d, J ¼ 10.0 Hz,
2H, p-cymene phenyl-H), 5.26–5.25 (d, J ¼ 5.0 Hz, 2H, p-cymene phenyl-H), 2.94-2.23 (m, 1H, p-cymene CH(CH3)2), 2.86 (s,
3H, p-cymene CH3), 1.65–1.29 (d, J ¼ 10.0 Hz, 6H, p-cymene
CH(CH3)2). 13C NMR (125 MHz, CDCl3): d, ppm 178.59 (C ¼ Se),
158.84 (C ¼ O), 137.17, 129.38, 128.66, 126.47, 122.82 (aromatic carbons), 112.91, 102.88, 98.90, 83.23, 82.33 (aromatic
carbons of p-cymene), 31.25, 29.70, 18.42 (aliphatic carbons).
LC-MS ¼ 600.42 [M] þ.
4.2.1 [Ru(II)(g6-p-cymene) L1] (1)
[Ru(II)(g6-p-cymene)]2 (0.22 g, 0.44 mmol) and L1 (0.326 g,
0.88 mmol) were used. Yield: 71%. Orange solid, m.p.: 206 C.
Anal. Calc. for C29H24Cl2N2ORuSe: C, 47.30; H, 4.30; N, 4.60.
Found: C, 47.15; H, 4.42; N, 4.56. UV–Vis (DMF): kmax, nm 267,
334, 430. FT-IR: V, cm1 3207, 3120 (N–H), 3022 (¼C–H), 1663
(C ¼ O), 1262 (C ¼ Se). 1H NMR (500 MHz, CDCl3): d, ppm
13.17 (s, 1H, NH), 11.50 (s, 1H, NH), 8.25–8.24 (d, J ¼ 5.0 Hz,
1H), 7.92–7.84 (d, J ¼ 5.0 Hz, 1H), 7.82–7.61 (m, 4H), 7.39–7.60
(m, 1H), 7.43–7.08 (t, J ¼ 5.0 Hz, 1H), 5.39–5.27 (d, J ¼ 10.0 Hz,
2H, p-cymene phenyl-H), 5.14–5.20 (d, J ¼ 5.0 Hz, 2H, p-
Acknowledgments
The author Moideen Musthafa is thankful to MHRD, Govt. of India for
providing senior research fellowship and Ramaiah Konakanchi, thanks
the Malla Reddy Engineering College for Women (Autonomous
Institution), Hyderabad, India, for support and encouragement during
this research work.
Disclosure statement
No potential conflict of interest was reported by the authors.
JOURNAL OF BIOMOLECULAR STRUCTURE AND DYNAMICS
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