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Synthesis of ruthenium(II) complexes and characterization of their cytotoxicity in vitro, apoptosis, DNA-binding and antioxidant activity.
European Journal of Medicinal Chemistry 45 (2010) 3087e3095
Contents lists available at ScienceDirect
European Journal of Medicinal Chemistry
journal homepage: http://www.elsevier.com/locate/ejmech
Original article
Synthesis of ruthenium(II) complexes and characterization of their cytotoxicity
in vitro, apoptosis, DNA-binding and antioxidant activity
Yun-Jun Liu a, *, Cheng-Hui Zeng a, Zhen-Hua Liang a, Jun-Hua Yao b, Hong-Liang Huang c, *,
Zheng-Zheng Li a, Fu-Hai Wu d, *
a
School of Pharmacy, Guangdong Pharmaceutical University, Guangzhou, 510006, PR China
Instrumentation Analysis and Research Center, Sun Yat-Sen University, Guangzhou, 510275, PR China
School of Life Science and Biopharmacological, Guangdong Pharmaceutical University, Guangzhou, 510006, PR China
d
School of Public Health, Guangdong Pharmaceutical University, Guangzhou, 510006, PR China
b
c
a r t i c l e i n f o
a b s t r a c t
Article history:
Received 28 January 2010
Received in revised form
26 March 2010
Accepted 29 March 2010
Available online 3 April 2010
A new ligand DBHIP and its two ruthenium (II) complexes [Ru(bpy)2(DBHIP)](ClO4)2 (1) and [Ru
(phen)2(DBHIP)](ClO4)2 (2) have been synthesized and characterized. The binding behaviors of the two
complexes to calf thymus DNA were investigated by absorption spectra, viscosity measurements, thermal
denaturation and photoactivated cleavage. The DNA-binding constants for complexes 1 and 2 have been
determined to be 8.87 0.27 104 M1 (s ¼ 1.83) and 1.32 0.31 105 M1 (s ¼ 1.84). The results suggest
that these complexes interact with DNA through intercalative mode. The cytotoxicity of DBHIP, complexes 1
and 2 has been evaluated by MTT assay. The apoptosis assay was carried out with acridine orange/ethidium
bromide (AO/EB) staining methods. The studies on the mechanism of photocleavage demonstrate that
superoxide anion radical (O2) and singlet oxygen (1O2) may play an important role.
Crown Copyright Ó 2010 Published by Elsevier Masson SAS. All rights reserved.
Keywords:
Ruthenium(II) complexes
DNA-binding
Cytotoxicity
Apoptosis
1. Introduction
Studies on the interaction of transition metal complexes with DNA
continue to attract the attention of researcher due to their importance
in design and development of synthetic restriction enzymes,
chemotherapeutic drugs and DNA foot printing agents, DNA cleavage
agents and DNA “molecular light switch” [1e7]. The interaction of
DNA with ruthenium(II) polypyridine complexes containing planar
polycyclic heteroaromatic ligand has been widely studied due to their
unique spectroscopic and electrochemical properties [8e10]. The rich
optical properties of these complexes facilitate assessments of their
DNA-binding capabilities as binding to DNA can be probed through
changes in absorption and emission spectra. Despite a considerable
amount of literatures have reported that ruthenium(II) complexes can
bind to DNA through intercalation [11e15]. The binding mode of
parent [Ru(phen)3]2þ remains an issue of rigorous debate [16,17]. On
the other hand, many Ru(II) polypyridyl complexes exert rather
potent activities against selected tumor cells [18,19] and can be
candidates for drugs. In this report, a new intercalative ligand DBHIP
(2-(3,5-dibromo-4-hydroxyphenyl)imidazo[4,5-f][1,10]phenanthroline) and its Ru(II) complexes [Ru(bpy)2DBHIP](ClO4)2 (1) (bpy ¼ 2,20 bipyridine) and [Ru(phen)2DBHIP](ClO4)2 (2) (phen ¼ 1,10-phenanthroline, Scheme 1) have been synthesized and characterized by
elemental analysis, FAB-MS, ESI-MS, IR, 1H NMR and 13C NMR. The
DNA-binding behaviors of these complexes were investigated by
absorption titration, luminescence spectroscopy, thermal denaturation, viscosity measurements and photoactivated cleavage. The
results show that complexes 1 and 2 interact with CT-DNA by intercalative mode. The studies on the mechanism of photocleavage reveal
that singlet oxygen (1O2) and superoxide anion radical (O2) may play
an important role. The cytotoxicity of ligand DBHIP and complexes 1
and 2 has been evaluated by MTT assay. The apoptosis of BEL-7402
cells induced by Ru(II) complexes was investigated. The retardation
assay of pGL 3 plasmid DNA by complexes 1 and 2 was also explored.
The antioxidant activity of DBHIP and complexes 1 and 2 was performed by hydroxyl radical scavenging method.
2. Results and discussion
Abbreviations: DBHIP, 2-(3,5-dibromo-4-hydroxyphenyl)imidazo[4,5-f][1,10]
phenanthroline; CT-DNA, calf thymus; MTT, 3-(4,5-dimethylthiazol-2-yl)-2,5diphenyltetrazolium bromide; bpy, 2,20 -bipyridine; phen, 1,10-phenanthroline.
* Corresponding author. Tel.: þ86 20 39352122; fax: þ86 20 39352128.
E-mail addresses: lyjche@163.com (Y.-J. Liu), hhongliang2004@yahoo.com.cn
(H.-L. Huang), fuhaiwu@163.com (F.-H. Wu).
2.1. Synthesis and characterization
The ligand, DBHIP, was prepared with a method similar to that
described by Steck and Day [20]. Refluxing of 1,10-phenanthroline-
0223-5234/$ e see front matter Crown Copyright Ó 2010 Published by Elsevier Masson SAS. All rights reserved.
doi:10.1016/j.ejmech.2010.03.042
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Y.-J. Liu et al. / European Journal of Medicinal Chemistry 45 (2010) 3087e3095
Scheme 1. The structure of complexes.
5,6-dione and 3,5-dibromo-4-hydroxybenzaldehyde in the presence of ammonium acetate and glacial acid produced the desired
ligand in high yields. Complexes 1 and 2 were prepared by direct
reaction of ligand with the appropriate mole ratios of the precursor
complexes cis-[Ru(bpy)2Cl2]$2H2O [21] and cis-[Ru(phen)2Cl2]$
2H2O [21] in ethanol. The yields were good to moderate. The
desired Ru(II) complexes were isolated as their perchlorates and
were purified by column chromatography. The structures of ligand
and its complexes were confirmed by elemental analysis, FAB-MS,
ES-MS, IR, 1H NMR and 13C NMR spectroscopy.
In the 1H NMR spectra, for ligand and complexes 1 and 2, the
chemical shifts of protons on the nitrogen atoms of imidazole ring
were not observed, probably because the protons are very active and
easy to be exchanged quickly between the two nitrogens of the
imidazole ring in solution, Similar examples have been reported
previously [22]. The 13C NMR sprectra for ligand and its complexes
were assigned according to literature [23]. The changes of chemical
shifts of C(a) of 3.58 and 2.86 ppm for complexes 1 and 2 in
comparison with the free ligand are observed. This fact affirms that
the free ligand is coordinated to metal. The complexes were also
characterized by electrospray mass spectrometry (ESI-MS). In the
ESI-MS spectra for the complexes 1 and 2, as expected, the intense
signals for [Me2ClO4eH]þ and [Me2ClO4]2þ were observed, the
obtained molecular weights are consistent with the expected values.
2.2. DNA-binding studies
2.2.1. Electronic absorption titration
The electronic absorption spectra of complexes 1 and 2 mainly
consist of three resolved bands. The low energy absorption band
centered at 450e470 nm is assigned to metal-to-ligand charge
transfer (MLCT) transition, the band at 330e350 nm is attributed to
pep* transition and the other band below 300 nm is attributed to
intraligand (IL) pep* transition by comparison with the spectrum
of other polypyridyl Ru(II) complexes [13,24,25].
The absorption spectra of complexes 1 and 2 in the absence and
presence of CT-DNA are given in Fig. 1. As the DNA concentration is
increased, the MLCT transition bands of complexes 1 at 459 and 2 at
457 nm exhibit hypochromism of about 25.92 and 26.64%, and
bathochromism of 2 and 3 nm, respectively, but the hypochromism
at 337 nm for 1 and 343 nm for 2 reaches as high as 64.8 and 38.5%.
These spectral characteristics may suggest a mode of binding that
involves a stacking interaction between the aromatic chromophore
and the DNA base pairs.
In order to further elucidate the binding strength of the
complexes, the intrinsic constants K were determined by monitoring
the changes of absorbance in the MLCT band with increasing
concentration of CT-DNA. The values of Kb are 8.87 0.27 104 M1
(s ¼ 1.83) and 1.32 0.35 105 M1 (s ¼ 1.84) M1 for 1 and 2,
Fig. 1. Absorption spectra of complexes 1 (a) and 2 (b) in TriseHCl buffer upon addition of CT-DNA. [Ru] ¼ 20 mM. Arrow shows the absorbance change upon the increase of DNA
concentration. Plots of (3a 3f)/(3b 3f) vs. [DNA] for the titration of DNA with Ru(II) complexes.
Y.-J. Liu et al. / European Journal of Medicinal Chemistry 45 (2010) 3087e3095
3089
2.2.3. Luminescence studies
Ruthenium(II) complexes can emit in the Tris buffer at room
temperature. Emission intensity of complexes 1 and 2 from their
MLCT excited states upon excitation at 459 and 457 nm is found to
depend on DNA concentration. As shown in Fig. 3, upon the addition of CT-DNA, an obvious enhancement in emission intensity was
observed for the two complexes. For complex 1 (l ¼ 597 nm), the
emission intensity shows only around 126.33% increase and saturated at a [DNA]/[Ru] ratio of 7.44:1. For complex 2 (l ¼ 589 nm),
the emission intensity shows around 161.45% increase saturated at
a [DNA]/[Ru] ratio of 9.92:1. This clearly indicates that complex 2 is
in a more hydrophobic environment in the presence of DNA when
compared to complex 1.
Fig. 2. Effect of increasing amounts of complexes 1 (-) and 2 (C) on the relative
viscosity of calf thymus DNA at 25 (0.1) C. [DNA] ¼ 0.30 mM.
respectively. These data suggest that the DNA-binding affinities of
complexes are in the order: A(2) > A(1). These values are comparable
to that of complexes [Ru(bpy)2PIP]2þ (4.7 0.2 105 M1, PIP ¼ 2phenylimidazo[4,5-f][1,10]phenanthroline) [26] and [Ru
(bpy)2HPIP]2þ (6.5 0.3 105 M1, HPIP ¼ 2-(2-hydroxyphenyl)
imidazo[4,5-f][1,10]phenanthroline) [27] but is not as strong as that
of [Ru(bpy)2dppz]2þ (4.9 106 M1, dppz ¼ dipyrido[2,3-a:30 ,20 -c]
phenazine) [28].
2.2.2. Viscosity measurements
Further clarification of the interactions between the Ru(II)
complexes and DNA was carried out by viscosity measurements. It
is popularly accepted that a partial and/or nonclassical intercalation
of ligand could bend (or kink) the DNA helix, reduces its effective
length and, concomitantly, its viscosity; A classical intercalation of
a ligand into DNA is known to cause a significant increase in the
viscosity of a DNA solution due to an increase in the separation of
the base pairs at the intercalation site and, hence, an increase in the
overall DNA molecular length [29]. Fig. 2 shows the changes in the
relative viscosity of CT-DNA on addition of 1 and 2. Upon increasing
the amounts of complexes 1 and 2, the relative viscosity of CT-DNA
solution increases steadily. These results suggest that complex 1
and 2 intercalates between the base pair of DNA.
2.2.4. Thermal denaturation studies
The thermal behavior of DNA in the presence of complexes can
give insight into the conformation change as the temperature
is raised. The melting temperature Tm of DNA solution, which is
defined as the temperature where half of the total base pairs is
unbonded, is usually introduced to study the interaction of transition
metal complexes with nucleic acid. Generally, the melting temperature of DNA increases when metal complexes bind to DNA by
intercalation, as intercalation of the complexes between DNA base
pairs causes stabilization of base stacking and hence raises the
melting temperature of double-stranded DNA. The melting curves of
CT-DNA in the absence and presence of complex are presented in
Fig. 4. In the absence of any added complexes, the thermal denaturation carried out for DNA gave a Tm of 68.9 0.2 C under our
experimental conditions. The melting point increased by þ6.3 C for
complex 1 and þ7.9 C for complex 2, respectively. The large increase
in Tm of DNA with the two Ru(II) complexes are comparable to that
observed for classical intercalators [30,31].
The binding constants of complexes 1 and 2 to CT-DNA at Tm
were determined by McGee’s equation [32].
1
1
1
R
¼
lnð1 þ KLÞn
0
D
H
T
Tm
m
m
(1)
0 and T are the melting temperature of CT-DNA alone and
where Tm
m
in the presence of complex, respectively. DHm is the enthalpy of
DNA melting (per bp), R is the gas constant, K is the DNA-binding
constant at Tm, L is the free Ru(II) complex concentration, and n is
the binding site size.
The value of DHm ¼ 6.9 kcal mol1 was determined by different
scanning calorimetry [29]. On the basis of the absorption spectra
Fig. 3. Emission spectra of complexes 1 (a) and 2 (b) in TriseHCl buffer in the absence and presence of CT-DNA. Arrow shows the intensity change upon increasing DNA
concentrations.
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Y.-J. Liu et al. / European Journal of Medicinal Chemistry 45 (2010) 3087e3095
method suggested by Carter et al. [33], this difference between the
two sets of binding constants should be caused by monitoring the
absorption changes of different substances [DNA (260 nm),
complexes 1 (459 nm) and 2 (457 nm)] and by different calculation
method. According to the van’t Hoffs equations (2e4) [34]
Fig. 4. Thermal denaturation of CT-DNA in the absence (-) and presence of complexes
1 (:) and 2 (C). [Ru] ¼ 32 mM, [DNA] ¼ 80 mM.
titration experiment and the neighbor-exclusion principle, the
values of n for complexes 1 and 2 were 1.83 and 1.84 bp (base pairs).
The binding constants K for complexes 1 and 2 at Tm were calculated to be 2.31 103 and 3.45 103 M1, respectively. Comparing
with those obtained from the absorption titration, although the
binding constants obtained from thermal denaturation method are
different from those obtained from absorption titration with the
DH 0 1 1
K
ln 2 ¼
K1
R T1 T2
(2)
DG0T ¼ RTln K
(3)
DG0T ¼ DH T DS0
(4)
where K1 and K2 are the DNA-binding constants of the complexes
at the temperature of T1 and T2, respectively. DH0, DG0T and DS0 are
the changes of standard enthalpy, standard free energy and
standard entropy of binding of the complex to CT-DNA. The values
of DGT0, DH0, and DS0 were 28.23 kJ mol1, 62.72 kJ mol1 and
115.77 J mol1 K1 for complex 1, and 29.21 kJ mol1,
60.99 kJ mol1 and 106.64 J mol1 K1 for complex 2.
2.2.5. Photoactivated cleavage of pBR 322 DNA
When circular plasmid DNA is subject to electrophoresis, relatively fast migration will be observed for the intact supercoiled
form (Form I); If scission occurs on one strand (nicked), the
supercoiled will relax to generate a slower-moving open circular
form (Form II) [35]. A number of metal polypyridyl complexes have
been shown to exhibit DNA photocleaving ability [6,13,15]. The
Fig. 5. (a) Photoactivated cleavage of pBR 322 DNA in the presence of different concentrations of Ru(II) complexes after irradiation at 365 nm for 30 min. (b) Photoactivated cleavage
of supercoiled pBR 322 DNA by complex 1 and 2 (20 mM) in the absence and presence of different inhibitors [100 mM mannitol, 200 mM dimethylsulfoxide (DMSO), 1000 U ml1
superoxide dismutase (SOD), 1.2 mM distidine] after irradiation at 365 nm for 30 min. (c) Bar diagram representation of the effect of inhibitors on the photoactivated cleavage
activity of complexes 1 and 2.
Y.-J. Liu et al. / European Journal of Medicinal Chemistry 45 (2010) 3087e3095
3091
superoxide anion radical (O2) quencher, the cleavage was obviously improved. The DNA cleavage of the plasmid was inhibited in
the presence of the singlet oxygen (1O2) scavenger histidine [38],
suggesting that 1O2 is likely to be the reactive species responsible
for the cleavage reaction. Related results of enhancement by SOD
and inhibition by singlet oxygen scavengers have been observed
by other ruthenium intercalators [6,13,23]. Fig. 5c shows the bar
diagram representation of the percentage of cleavage (C) for
complexes 1 and 2.
Fig. 6. Agarose gel electrophoresis retardation of pGL 3 plasmid DNA by complexes 1
and 2. Lane (0, 5) (DNA alone), lane 1e4, 6e9 in the different concentration of Ru(II)
complexes. 1: (1) 0.33 mM; (2) 1 mM; (3) 1.67 mM; (4) 2.33 mM. 2: (6) 0.33 mM;
(7) 1 mM; (8) 1.67 mM; (9) 2.33 mM. [DNA] ¼ 0.5 mg.
cleavage of plasmid DNA can be monitored by agarose gel electrophoresis. As shown in Fig. 5a, both complexes are able to photocleave pBR 322 DNA. No obvious DNA cleavage was observed for
the control in which metal complex was absent (DNA alone), or
incubation of the plasmid with the Ru(II) complexes in the dark
(data not presented). With increasing concentration of complexes,
the Form I decrease and Form II increase gradually. Under the same
experimental condition, complex 2 exhibits more effective DNA
cleavage activity than complex 1. The different cleaving efficiency
may be ascribed to the different binding affinity of two Ru(II)
complexes to DNA.
In order establish the reactive species responsible for the
photoactivated cleavage of the plasmid, the influence of different
potentially inhibiting agents was investigated. Fig. 5b shows that
the DNA cleavage of the plasmid by complexes 1 and 2 was not
inhibited in the presence of hydroxyl radical (OH) scavengers such
as mannitol [36] and dimethylsulfoxide (DMSO) [37], which
indicated that hydroxyl radical was not likely to be the cleaving
agent. In the presence of superoxide dismutase (SOD), a facile
2.2.6. Retardation of pGL 3 plasmid DNA by Ru(II) complexes
DNA condensation into compact structures has been received
considerable attention to understand the mechanism of uptake of
gene vectors in living cells. Several studies reported the polyamine
can condense DNA [39e41]. However, the studies of small molecules to condense DNA have been less paid attention. Ji and
co-workers reported the Ru(II) complexes [Ru(bpy)2(PIPSH)]2þ and
[Ru(phen)2(PIPSH)]2þ [42] can effectively condense DNA at
a concentration of 80 mM. The abilities of complexes 1 and 2 to
condense pGL 3 DNA were evaluated by gel retardation assay. Fig. 6
shows when the concentrations of complexes 1 and 2 are 0.33 and
1.0 mM, complex 1 and 2 cannot condense the DNA, however, the
concentrations of 1 and 2 reach 1.67 and 2.33 mM, the effects of
condensation of DNA were observed.
2.3. Cytotoxic assay in vitro
Research on bioactive polypyridyl complexes is a very active field
and has been paid great attention. Many polypyridyl complexes show
interesting bioactivity, complex [Ru(bpy)2(dppn)]2þ can effectively
inhibit the proliferation of MCF-7 cells with a low IC50 (3.3 1.2 mM)
Fig. 7. Cell viability of DBHIP, 1 and 2 on tumor BEL-7402 (a), C-6 (b), HepG-2 (c) and MCF-7 (d) cell proliferation in vitro. Each data point is the mean standard error obtained from
three independent experiments.
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Y.-J. Liu et al. / European Journal of Medicinal Chemistry 45 (2010) 3087e3095
Table 1
The IC50 values for DBHIP, complexes 1 and 2 against selected cell lines.
Compound
DBHIP
1
2
cis-Platin
IC50 (mM)
BEL-7402(24 h)
BEL-7402 (48 h)
C-6
HepG-2
MCF-7
15.26 4.11
56.10 4.59
33.18 3.59
30.25 3.64
11.18 3.87
41.29 4.58
21.62 3.71
20.12 2.35
15.05 4.45
>100
30.75 3.50
10.26 2.78
10.65 3.62
>100
28.35 2.58
26.25 3.12
18.45 2.89
>100
21.91 2.52
11.34 2.38
[43]. Treatment of HT-29 and MCF-7 cells with [Rh(DMSO)Cl3(dpq)]
leads to significant decreases in cellular oxygen consumption and the
rate of extracellular acidification [44]. To test the cytoxicity of ligand
and ruthenium(II) complexes, BEL-7402 (hepatocellular), C-6 (Rat
glioma), HepG-2 (hepatocellular) and MCF-7 (breast cancer) cell lines
were cultured in the presence of varying concentrations of ligand and
corresponding ruthenium(II) complexes for 48 h. The cytoxicity was
analyzed by MTT assay as described in the experimental section. The
inhibitory concentration 50 (IC50), defined as the concentration
required to reduce the size of the cell population by 50%. The IC50
values obtained of ligand and its complexes against selected four
tumor cell lines are given in Table 1. The cell viability (%) obtained with
continuous exposure for 48 h are depicted in Fig. 7. The toxicity of
ligand and complexes was found to be concentration dependent, the
cell viability decreased with increasing the concentration of DBHIP, 1
and 2. The IC50 values are 11.18, 15.06, 10.65, 18.45 for DBHIP, 41.29,
>100, >100, >100 for complex 1, and 21.62, 30.75, 28.35, 21.91 for
complex 2 against BEL-7402, C-6, HepG-2 and MCF-7 cell lines,
respectively. Comparing the IC50 values of complexes 1 and 2,
complex 2 appeared to be higher cytotoxicity than complex 1, but
smaller than those of cisplatin. Furthermore, we also found that the
coordination of the DBHIP to the Ru(II) metal center to form
complexes 1 and 2, the antitumor activity of DBHIP was obviously
weakened.
2.4. Apoptosis assay
Induction of apoptosis is one of the considerations in drug
development, most of the cytotoxic anticancers drugs in current use
have been shown to induce apoptosis in susceptible cells [45]. On the
basis of overall cell morphology and cell membrane integrity, necrotic
and apoptotic cells can be distinguished from one another using
fluorescence microscope. Fluorescence microscopic analysis showed
untreated BEL-7402 cells were stained with uniform green fluorescence (Fig. 8a). After treatment with complex 2 for a period of 24 h,
the clear morphological changes in the nucleolus was observed
(Fig. 8b) and green apoptotic cells containing apoptotic bodies, as
well as red necrotic cells, were also found. Similar result was also
observed for complex 1.
2.5. Antioxidant activity
The hydroxyl radical (OH) in aqueous media was generated by the
Fenton system [46]. The antioxidant activity of the ligand DBHIP and
complexes 1 and 2 against hydroxyl radical (OH) were investigated.
Fig. 9 and Table 2 depict the inhibitory effect of ligand and complexes
on OH. The average suppression ratios for OH increase with the
increasing concentration of DBHIP,1 and 2 in the range of 0.5e3.5 mM.
The suppression ratio against OH valued from 1.05 to 52.92% for
DBHIP, 7.62 to 68.76% for complex 1 and 6.88 to 61.73% for complex 2.
The antioxidant activity against hydroxyl radical of complexes 1
(IC50 ¼ 0.70 mM) and 2 (IC50 ¼ 0.80 mM) is comparable under the
same experimental condition. It is clear that the hydroxyl radical
scavenging activity can be enhanced when ligand (IC50 ¼ 1.11 mM)
Fig. 8. BEL-7402 cell were stained by AO/EB and observed under fluorescence
microscopy. BEL-7402 cell without treatment (a) and in the presence of complex 2
(b) incubated at 37 C and 5% CO2 for 24 h. Cells in a, b and c are apoptotic, living and
necrotic cells, respectively.
Y.-J. Liu et al. / European Journal of Medicinal Chemistry 45 (2010) 3087e3095
Fig. 9. Scavenging effect of the ligand DBHIP and complexes 1 and 2 on hydroxyl
radicals. Experiments were performed in triplicate.
bonds Ru(II) metal center to form complexes. Similar results were
also observed for other ruthenium(II) complexes [22]. Due to the
lower IC50 values, DBHIP and complexes 1 and 2 may be potential
drugs to eliminate the radicals.
3093
and MCF-7 (breast cancer) were purchased from American Type
Culture Collection, agarose and ethidium bromide were obtained
from Aldrich. RuCl3$xH2O was purchased from Kunming Istitution of
Precious Metals. 1,10-phenanthroline was obtained from Guangzhou
Chemical Reageng Factory. Doubly distilled water was used to
prepare buffers (5 mM Tris(hydroxymethylaminomethane)eHCl,
50 mM NaCl, pH ¼ 7.2). A solution of calf thymus DNA in the buffer
gave a ratio of UV absorbance at 260 and 280 nm of ca. 1.8e1.9:1,
indicating that the DNA was sufficiently free of protein [47]. The DNA
concentration per nucleotide was determined by absorption spectroscopy using the molar absorption coefficient (6600 M1 cm1) at
260 nm [48].
Microanalysis (C, H, and N) was carried out with a PerkineElmer
240Q elemental analyzer. Fast atom bombardment (FAB) mass
spectra were recorded on a VG ZAB-HS spectrometer in a 3-nitrobenzyl alcohol matrix. Electrospray mass spectra (ES-MS) were
recorded on a LCQ system (Finnigan MAT, USA) using methanol as
mobile phase. The spray voltage, tube lens offset, capillary voltage
and capillary temperature were set at 4.50 kV, 30.00 V, 23.00 V and
200 C, respectively, and the quoted m/z values are for the major
peaks in the isotope distribution. 1H NMR and 13C NMRR spectra
were recorded on a Varian-500 spectrometer. All chemical shifts
were given relative to tetramethylsilane (TMS). UV/Vis spectra were
recorded on a Shimadzu UV-3101PC spectrophotometer at room
temperature.
4.2. Synthesis of ligand and complexes
3. Conclusion
A new ligand DBHIP and its two ruthenium(II) complexes [Ru
(bpy)2(DBHIP)]2þ and [Ru(phen)2(DBHIP)]2þ have been synthesized
and characterized. The DNA-binding of these complexes with
CT-DNA indicates that the two complexes can intercalate between
DNA base pairs via intercalative ligand DBHIP. When irradiated at
365 nm, complexes 1 and 2 can efficiently cleave the plasmid pBR 322
DNA. The mechanism studies of photoactivated cleavage reveal that
singlet oxygen (1O2) and superoxide anion radical (O2) may play an
important role in the photocleavage. Cytotoxicity evaluation in vitro
shows that the ligand and its complex 2 all displayed antitumor
activity against the selected tumor cell lines and complexes 1 and 2
can induce the apoptosis of BEL-7402 cells. At high concentration,
complexes 1 and 2 can effectively condense pGL 3 plasmid DNA. The
experiments on antioxidant activity show that ligand and its
complexes may be potential drugs to eliminate the radicals.
4.2.1. Synthesis of ligand (DBHIP)
A mixture of 1,10-phenanthroline-5,6-dione (0.315 g, 1.5 mmol),
3,5-dibromo-4-hydroxyphenylaldehyde (0.419 g, 1.5 mmol), ammonium acetate (2.31 g, 30 mmol) and glacial acetic acid (30 cm3) was
refluxed with stirring for 2 h. The cooled solution was diluted with
water and neutralized with concentrated aqueous ammonia. The
precipitate was collected and purified by column chromatography on
silica gel (60e100 mesh) with ethanol as eluent to give the
compound as yellow powder. Yield: 81%. Anal. Calcd. for
C19H10N4Br2O: C, 48.54; H, 2.14; N, 11.92; Found: C, 48.51; H, 2.18; N,
11.89%. FAB-MS: m/z ¼ 471 [Mþ1]þ. IR (KBr, cm1): 3437, 2927, 1604,
1589, 1476, 1449, 1357, 1173, 1109, 1073, 805, 736, 670. 1H NMR
(500 MHz, DMSO-d6): 9.02 (d, 2H, Hc, J ¼ 8.5 Hz), 8.33 (d, 2H, Hi,
J ¼ 8.4 Hz), 8.01 (d, 2H, Ha, J ¼ 8.6 Hz), 7.22 (d, 2H, Hb, J ¼ 8.2 Hz), 3.26
(s, 1H, HOeH). 13C NMR (DMSO-d6, ppm): 163.35 C(k), 151.79 C(a),
147.02 C(c), 142.46 C(g), 129.75 C(h), 129.29 C(d, e, f), 123.08 C(i),
114.94 C(b), 109.71 C(j).
4. Experimental
4.1. Materials and methods
Calf thymus DNA (CT-DNA) was obtained from the Sino-American
Biotechnology Company. pBR 322 DNA was obtained from Shanghai
Sangon Biological Engineering & Services Co., Ltd. Dimethylsulfoxide
(DMSO) and RPMI 1640 were purchased from Sigma. Cell lines of
BEL-7402 (hepatocellular), C-6 (Rat glioma), HepG-2 (hepatocellular)
4.2.2. Synthesis of [Ru(bpy)2(DBHIP)](ClO4)2 (1)
A mixture of cis-[Ru(bpy)2Cl2]$2H2O (0.260 g, 0.5 mmol) and
DBHIP (0.185 g, 0.5 mmol) in ethanol (30 cm3) was refluxed under
argon for 8 h to give a clear red solution. Upon cooling, a red
precipitate was obtained by dropwise addition of saturated aqueous
NaClO4 solution. The crude product was purified by column chromatography on a neutral alumina with a mixture of CH3CN-toluene
(3:1, v/v) as eluant. The mainly red band was collected. The solvent
Table 2
The influence of investigated compounds for OH.
Comp
Average inhibition (%) for OH (mM)
0.5
1.0
1.5
2.0
2.5
3.0
3.5
DBHIP
1
2
1.05
7.62
6.88
28.85
36.77
30.49
37.52
51.72
46.34
43.05
53.21
52.02
46.64
59.94
57.40
50.37
64.27
59.49
52.92
68.76
61.73
Equation
IC50 (mM)
R2
Y ¼ 47.20þ58.92x
Y ¼ 60.69þ69.26x
Y ¼ 56.09þ65.81x
1.12
0.70
0.81
0.9804
0.9837
0.9871
IC50 values were calculated from regression lines where: x was log of the tested compound concentration and Y was percent inhibition of the tested compounds. When the
percent inhibition of the tested compounds was 50%, the tested compound concentration was IC50. R2 ¼ correlation coefficient.
3094
Y.-J. Liu et al. / European Journal of Medicinal Chemistry 45 (2010) 3087e3095
was removed under reduced pressure and a red powder was
obtained. Yield: 73%. Anal. Calcd. for C39H26Br2Cl2N8O9Ru: C, 43.27;
H, 2.42; N, 10.35; found: C, 43.23; H, 2.47; N, 10.37%. ESI-MS [CH3CN,
m/z]: 883.1 ([Me2ClO4eH]þ), 442.3 ([Me2ClO4]2þ). IR (KBr, cm1):
3433, 2923, 1602, 1584, 1445, 1423, 1363, 1121, 1088, 804, 767, 731,
670. 1H NMR (500 MHz, DMSO-d6): d 9.04 (d, 2H, Hc, J ¼ 8.0 Hz), 8.88
(d, 2H, H3, J ¼ 8.5 Hz), 8.84 (d, 2H, H30 , J ¼ 8.0 Hz), 8.22 (dd, 4H, H4,40 ,
J ¼ 7.8 Hz), 8.08 (d, 2H, Hi, J ¼ 8.0 Hz), 7.91 (d, 2H, Ha, J ¼ 8.0 Hz), 7.80
(d, 2H, H6, J ¼ 8.0 Hz), 7.78 (dd, 2H, H60 , J ¼ 7.6 Hz), 7.58 (ddd, 4H,
H5,50 ), 7.35 (dd, 2H, Hb, J ¼ 7.7 Hz), 3.37 (s, 1H, HOeH). 13C NMR
(DMSO-d6, ppm): 164.56 C (k), 156.81 C(2), 156.55 C(20 ), 151.33 C
(6, 60 ), 148.21 C(a), 143.75 C(c, g), 137.78 C(4), 137.61 C(40 ), 130.20 C(d,
e, f), 129.74 C(h), 127.79 C(3), 127.71 C(30 ), 125.41 C(i, b), 124.39 C(5),
124.32 C(50 ), 115.09 C(j).
4.2.3. Synthesis of [Ru(phen)2(DBHIP)](ClO4)2 (2)
This complex was synthesized in an manner identical to that
described for complex 1, with cis-[Ru(phen)2Cl2]$2H2O (0.280 g,
0.5 mmol) in place of cis-[Ru(bpy)2Cl2]$2H2O. Yield: 72%. Anal. Calcd.
for C43H26Br2Cl2N8O9Ru: C, 45.68; H, 2.32; N, 9.91; Found: C, 45.64;
H, 2.34; N, 9.95%. ESI-MS [CH3CN, m/z]: 930.0 ([Me2ClO4eH]þ),
465.53 ([Me2ClO4]2þ). IR (KBr, cm1): 3411, 2934, 1601, 1583, 1443,
1425, 1366, 1196, 1144, 1087, 845, 721, 626. 1H NMR (500 MHz,
DMSO-d6): d 9.02 (d, 2H, Hc, J ¼ 8.4 Hz), 8.767 (d, 4H, H4,7, J ¼ 8.5 Hz),
8.39 (s, 4H, H5,6), 8.29 (s, 2H, Hi), 8.13 (d, 2H, Ha, J ¼ 8.4 Hz), 8.08
(d, 2H, H2, J ¼ 8.0 Hz), 7.96 (d, 2H, H9, J ¼ 8.2 Hz), 7.74e7.79 (m, 6H,
H3,8,b), 3.37 (s, 1H, HOeH). 13C NMR (DMSO-d6, ppm): 163.42 C(k),
152.65 C(2), 152.55 C(9), 148.93 C(a), 147.25 C(4), 147.17 C(7), 144.24 C
(c, g), 136.63 C(h, 12), 130.36 C(5), 130.15 C(6), 129.65 C(d, e, f, 10, 11),
128.01 C(3), 127.97 C(8), 126.23 C(i), 125.38 C(b), 115.00 C(j).
Caution: Perchlorate salts of metal compounds with organic
ligands are potentially explosive, and only small amounts of the
material should be prepared and handled with great care.
4.3. DNA-binding and photoactivated cleavage
The DNA-binding and photoactivated cleavage experiments
were performed at room temperature. Buffer A [5 mM tris
(hydroxymethyl)aminomethane (Tris) hydrochloride, 50 mM NaCl,
pH 7.0] was used for absorption titration, luminescence titration
and viscosity measurements. Buffer B (50 mM TriseHCl, 18 mM
NaCl, pH 7.2) was used for DNA photocleavage experiments. Buffer
C (1.5 mM Na2HPO4, 0.5 mM NaH2PO4, 0.25 mM Na2EDTA, pH 7.0)
was used for thermal DNA denaturation experiments. Buffer D
(0.9% of physiological saline) was used for retardation assay of pGL
3 plasmid DNA.
The absorption titrations of the complex in buffer were performed using a fixed concentration (20 mM) for complex to which
increments of the DNA stock solution were added. Ru-DNA solutions were allowed to incubate for 5 min before the absorption
spectra were recorded. The intrinsic binding constants K, based on
the absorption titration, were measured by monitoring the changes
of absorption in the MLCT band with increasing concentration of
DNA using the following equation [33].
3a 3f
¼
3b 3f
rffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffi
ffi
b b2 2K 2 C t ½DNA=s
2KC
b ¼ 1 þ KCt þ K½DNA=2s
(5a)
(5b)
where [DNA] is the concentration of CT-DNA in base pairs, the
apparent absorption coefficients 3a, 3f and 3b correspond to Aobsed/
[Ru], the absorbance for the free ruthenium complex, and the
absorbance for the ruthenium complex in fully bound form,
respectively. K is the equilibrium binding constant, Ct is the total
metal complex concentration in nucleotides and s is the binding
site size.
Thermal denaturation studies were carried out with a PerkinElmer Lambda 35 spectrophotometer equipped with a Peltier
temperature-controlling programmer ( 0.1 C). The melting
temperature (Tm) was taken as the mid-point of the hyperchromic
transition. The melting curves were obtained by measuring the
absorbance at 260 nm for solutions of CT-DNA (80 mM) in the
absence and presence of the Ru(II) complex (32 mM) as a function of
the temperature. The temperature was scanned from 50 to 90 C at
a speed of 1 C min1. The data were presented as (A A0)/(Af A0)
versus temperature, where A, A0, and Af are the observed, the initial,
and the final absorbance at 260 nm, respectively.
Viscosity measurements were carried out using an Ubbelodhe
viscometer maintained at a constant temperature at 25.0 (0.1) C
in a thermostatic bath. DNA samples approximately 200 base pairs
in average length were prepared by sonicating in order to minimize
complexities arising from DNA flexibility [49]. Flow time was
measured with a digital stopwatch, and each sample was measured
three times, and an average flow time was calculated. Relative
viscosities for DNA in the presence and absence of complexes were
calculated from the relation h ¼ (t t0)/t0, where t is the observed
flow time of the DNA-containing solution and t0 is the flow time of
buffer alone [28,50]. Data were presented as (h/h0)1/3 versus
binding ratio [51], where h is the viscosity of DNA in the presence of
complexes and h0 is the viscosity of DNA alone.
For the gel electrophoresis experiment, supercoiled pBR 322 DNA
(0.1 mg) was treated with the Ru(II) complexes in buffer B, and the
solution was then irradiated at room temperature with a UV lamp
(365 nm, 10 W). The samples were analyzed by electrophoresis for
1.5 h at 80 V on a 0.8% agarose gel in TBE (89 mM Triseborate acid,
2 mM EDTA, pH ¼ 8.3). The gel was stained with 1 mg/ml ethidium
bromide and photographed on an Alpha Innotech IS-5500 fluorescence chemiluminescence and visible imaging system. The integrated density values (IDV) were given by FluorChem 5500 software.
The percentage of cleavage (C) was calculated according to Eq. (6),
where DI, DII and DIII are the IDVs of Form I (supercoil form), Form II
(nicking form) and Form III (linear form), respectively.
C ¼
DII þ 2DIII
DI þ DII þ DIII
(6)
4.4. Cytotoxicity assay
Standard
3-(4,5-dimethylthiazole)-2,5-diphenyltetraazolium
bromide (MTT) assay procedures were used [52]. Cells were placed
in 96-well microassay culture plates (1 104 cells per well) and
grown overnight at 37 C in a 5% CO2 incubator. Test compounds
were then added to the wells to achieve final concentrations
ranging from 106 to 104 M. Control wells were prepared by
addition of culture medium (100 mL). Wells containing culture
medium without cells were used as blanks. The plates were incubated at 37 C in a 5% CO2 incubator for 48 h. Upon completion of
the incubation, stock MTT dye solution (20 mL, 5 mg mL1) was
added to each well. After 4 h incubation, buffer (100 mL) containing
N,N-dimethylformamide (50%) and sodium dodecyl sulfate (20%)
was added to solubilize the MTT formazan. The optical density of
each well was then measured on a microplate spectrophotometer
at a wavelength of 490 nm. The IC50 values were determined by
plotting the percentage viability versus concentration on a logarithmic graph and reading off the concentration at which 50% of
cells remain viable relative to the control. Each experiment was
repeated at least three times to get the mean values. Four different
Y.-J. Liu et al. / European Journal of Medicinal Chemistry 45 (2010) 3087e3095
tumor cell lines were the subjects of this study: BEL-7402 (hepatocellular), C-6 (Rat glioma), HepG-2 (hepatocellular) and MCF-7
(breast cancer) (purchased from American Type Culture Collection).
4.5. Apoptosis studies
Apoptosis studies were performed with a staining method
utilizing acridine orange (AO) and ethidium bromide (EB) [53].
According to the difference in membrane integrity between
necrotic and apoptosis. AO can pass through cell membrane, but EB
cannot. Under fluorescence microscope, live cells appear green.
Necrotic cells stain red but have a nuclear morphology resembling
that of viable cells. Apoptosis cells appear green, and morphological
changes such as cell blebbing and formation of apoptotic bodies
will be observed.
A monolayer of BEL-7402 cells was incubated in the absence and
presence of complex 2 at concentration of 25 mM at 37 C and 5%
CO2 for 24 h. After 24 h, each cell culture was stained with AO/EB
solution (100 mg ml1 AO, 100 mg ml1 EB). Samples were observed
under a fluorescence microscope.
4.6. Scavenger measurements of hydroxyl radical (OH)
The hydroxyl radical (OH) in aqueous media was generated by the
Fenton system [46]. The solution of the tested complexes was
prepared with DMF (N,N-dimethylformamide). The 4 ml of assay
mixture contained following reagents: safranin (28.5 mM), EDTA-Fe
(II) (100 mM), H2O2 (44.0 mM), the tested compounds (0.5e3.5 mM)
and a phosphate buffer (67 mM, pH ¼ 7.4). The assay mixtures were
incubated at 37 C for 30 min in a water bath. After which, the
absorbance was measured at 520 nm. All the tests were run in triplicate and expressed as the mean. Ai was the absorbance in the
presence of the tested compound; A0 was the absorbance in the
absence of tested compounds; Ac was the absorbance in the absence
of tested compound, EDTA-Fe(II), H2O2. The suppression ratio (ha)
was calculated on the basis of (Ai A0)/(Ac A0) 100%.
Acknowledgements
This research is supported by the National Nature Science
Foundation of China (No. 30800227), the Science and Technology
Foundation of Guangdong Province (No. 2009B030803057) and
GuangdongPharmaceutical University for financial supports.
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