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Ruthenium(II) complexes: DNA-binding, cytotoxicity, apoptosis, cellular localization, cell cycle arrest, reactive oxygen species, mitochondrial membrane potential and western blot analysis.
International Journal of Current Science Research and Review
ISSN: 2581-8341
Volume 05 Issue 10 October 2022
DOI: 10.47191/ijcsrr/V5-i10-17, Impact Factor: 5.995
IJCSRR @ 2022
www.ijcsrr.org
Review on Broken-down Resistance to Diseases and Its Management; the
Hidden Challenge in Breeding and Production of Banana and Plantains in
Developing Countries
Kennedy Elisha Jomanga1, Shija Shilunga Lucas2, Ashiraf Rweyemela Mgenzi3, Magdalena Gaudence
Kiurugo4, Rosemary Frank Simba5, Emiliana Biseko6
1,3,4,5,6
International Institute of Tropical Agriculture (IITA).
2
Africa Inland Church Tanzania (AICT).
ABSTRACT: Resistant breakdown is the genetic vulnerability that is devastating agriculture breeding and production
of banana worldwide, therefore threateningburgeoning population.It takes 15 to 20 years for banana breeding pipeline
and other stakeholders to release a c ultivar that is fully evaluated to farmers. Disease like fusarium wilt disease
(race 1) was reported to wipe away Gros Michel and the Tropical Race 4 (TR4) has wiped away all cultivars which
were resistant to race1. Again banana breeding for resistant to sigatoka successively bred and released many hybrids
but of recently of these hybrids including FHIA hybrids, Yagambi KM 5, Paka, young Calcutta 4 and T8 has lost
their resistant to sigatoka. Due to political and commercial pressures, i t is true that most of the released resistant
cultivars are from single effective genes. Though durable resistance with a single dominant gene has been a serious
challenge to achieve in breeding, this is because of broken-down resistance. This review used online resource to
identify some causes of broken resistance in banana and provided some possible solutions to increase durability.
Causes of broken resistance includes the p ractice of monoculture in large area, illegal use of chemicals, multiple
infections, evolution of pathogens as the result of recombination, mutations, nature of interaction exhibited by
released cultivars, low genetic base in banana, gene flow, through introductions of pathogens and climate change.
It is widely accepted that different agronomic practices combined with strategic breeding and release of cultivars
can elongate durability of resistant cultivars to pathogens in agricultural system. Through all the literature searched
it is being unveiled yet the factors that govern quality and durability of resistance in resistant cultivars. I hereby
conclude that breeding for resistance to diseases in banana should go par pursue with other disease management
strategies. This is aimed at increasing durability of resistance to diseases in this highly expensive produced banana
and plantain hybrids.
KEYWORDS: Broken resistance, Banana cultivars, Breeding, Hybrids.
1.0. INTROCUTION
Plant disease causing pathogens are a constant menace to agricultural production and thus to food security, makingsignificant
economic losses around the world (Mensez and Romero, 2016). They are of global concern exerting a heavy toll on food crop
production, social and political stability of nations (Ristaino et al., 2020). Banana and plantains (banana) as other crop faces many
serious bio-constraints which includes fusarium wilt, xanthomonas wilt, weevils, sigatoka, banana bunch top virus disease,
nematodes, moko disease, etc. (Buddenhagen, 1986; Alakonya et al,. 2018; Wu, et al., 2021; Erere et al., 2021). Yield losses of up
100% in susceptible banana cultivars are reported due to diseases (De Lapeyre de Bellaire, et al. 2006; Brito et al. 2015). Strategies
to fight diseases in commercial and small-scale production account for 30-40% of total production cost, whereas no chemicals yield
reduction ranging from 30-100% have been recorded (Sagi et al. 1998). Cultural practices and chemical application have been
reported to be ineffective and environmentally hazardous respectively. The use of resistant cultivars is the only reported reliable,
cheaper, applicable and sustainable method of disease control to both commercial and smallholder farmers in developing countries
(Lorenza et al., 2009; Kobayashi et al., 2014; Adeleke et al., 2021).Thus, genes for resistance to diseases can technically be
considered one of the most important natural resources determining the survival of the human species (Mundt, 1994). Breeding
3939 *Corresponding Author: Kennedy Elisha Jomanga
Volume 05 Issue 10 October 2022
Available at: ijcsrr.org
Page No.-3939-3953
International Journal of Current Science Research and Review
ISSN: 2581-8341
Volume 05 Issue 10 October 2022
DOI: 10.47191/ijcsrr/V5-i10-17, Impact Factor: 5.995
IJCSRR @ 2022
www.ijcsrr.org
programs were established in the year 1920s to dateand many cultivars have been released to be used for production purposes in the
past many decades (Bakry et al., 2009).Nevertheless, this control strategy is also likely to become more difficult to achieve, because
of expected increase in climate change, human-mediated invasions and disease re-emergence (Anderson et al., 2004).
It is obvious that crop improvement has given the best cultivars, which are rewarding to farmer with their yields,
the trader and the consumer with their qualities (Adugna, 2004). The widely grown improved cultivars are genetically
uniform, which invites them to a risk of disease epidemics ( Adugna, 2004; Lorenza et al., 2009). As it have been
reported host plant resistance is the most preferable means of crop protect ion since it is cost effective and ecological
trustworthiness (Arango-Isaza et al., 2016). But, it has been a challenge to the breeders to achieve durable resistance
in banana and plantain (Adugna, 2004).The major challenge is broken resistant, which have been widely recorded worldwide
in recent years (Daldal et al., 1989; Hollomon, 2015; Arango-Isaza et al., 2016; Djidjou-Demasse et al., 2017). Major risks and
uncertainties persist whereby pathogens rapidly overcome disease control methods using resistant cultivars and fungicides (Lo
Iacono et al., 2013; Kobayashi et al., 2014). Broken-down resistant phenomenon has endangered the banana industry in developing
countries, beside been costly to the banana Breeders, Researchers, famers and Funders. Breeders spend much time and resources
into introgression of resistance traits in banana genotypes, which takes 15 to 20 years. Still most of the banana breeding stations in
developing countries are mainly donor funded, so broken resistance report is painful. For example FHIA, Yagambi KM 5,Paka,
young Calcutta 4 and T8 were released as highly resistant to sigatoka disease but of recent report shows that they are susceptible
to the same disease (Fullerton and Olsen, 1995; Miranda et al., 2006; Pegg et al., 2019;Kimunye et al., 2021). Cavendish were
released as resistant cultivar to replace the susceptible Gross Michel but outbreak of new strain TR4 broke the resistance in
Cavendish cultivars (Pegg et al., 2019; Thangavelu et al., 2020). This shows that all way-long after 15 to 20 years the released
cultivars can lose theirs resistance within a short period of time. This is a big loss which needs research attention and allocation of
resource to minimize the chances of broken resistance in our highly valuable released cultivars. There are need to fine-tune the
breeding research objectives to include the management aspect to minimize the chances of broken resistance to save fund spend in
breeding. It is reported that the durability of disease resistance in any genotype is affected by the evolutionary potential of the
pathogen population (McDonald and Linde (2002). That is to say pathogens with a high evolutionary potential are more likely to
overcome genetic resistance than pathogens with a low evolutionary potential.This review used online resources of information to
try to bring understanding of the importance of broken resistance and its management aspect for durable resistance in banana and
plantain breeding and production. The information can help Breeders, Researchers and Extension Officers to fine-tune breeding
objectives and put forward recommendation to farmers for sustainable yield.
1.1. How do pathogens get infect their hosts
Disease caused by pathogen is any abnormal condition or malfunctions that damages to food production, economic development,
ecological resilience, and natural landscapes over human history (Mcmullen and Lamey, 2001; He et al., 2021). Pathogens are
responsible for both numerical changes in host populations and evolutionary changes through selection for resistant genotypes
(Gilbert, 2002).Infectious diseases are caused by organisms that attack plants and get their nutrition from them (Mcmullen and
Lamey, 2001). Nutrients are present in apoplasts or within the cell, therefore, access to these materials involve tissue and cellular
degradation by the necrotrophic pathogens, whereas living host cells are manipulated by the biotrophic pathogens in such a way so
that nutrients are obtained without killing the host cells (Faulkner and Robatzek 2012). Other group hemibiotrophic pathogens
display two phases during the infection process; first is an initial biotrophic phase followed by a necrotrophic stage (Selin et al.,
2016). Upon contact with a potential host plant, some pathogens gains entrythrough the plant epidermal surfaces by employing
cascade of enzymes that are capable of degrading plant host cell wall surfaces (Toruno et al., 2016). Or some fungi can directly
penetrate the leaf surface using specialized infection structures called appressoria. In some other casesseveral pre-existing physical
barriers such as the cuticle of leaves prevent entry into plant tissues, so that the pathogen has to rely on mainly natural openings,
e.g., stomata and hydathodes or wound sites, to gain access (Mcmullen and Lamey, 2001; Gohre and Robertzek, 2008). Once in the
apoplastic pathogens secretes effectors that act in the apoplast or inside the cytoplasm of plant cells to manipulate their hosts (Toruno
et al., 2016).
3940 *Corresponding Author: Kennedy Elisha Jomanga
Volume 05 Issue 10 October 2022
Available at: ijcsrr.org
Page No.-3939-3953
International Journal of Current Science Research and Review
ISSN: 2581-8341
Volume 05 Issue 10 October 2022
DOI: 10.47191/ijcsrr/V5-i10-17, Impact Factor: 5.995
IJCSRR @ 2022
www.ijcsrr.org
1.2. Reaction of banana upon infection
Molecular communication between plant and pathogen commences almost immediately after the pathogen makes contact with the
host surfaces (Fujita et al. 2004). Micro-organisms groups including fungi, oomycetes, bacteria, viruses, and nematodes contain
pathogenic species that have evolved to exploit living plants as a nutrient sources (van’t Slot et al., 2007). Even though pathogens
have vast differences in their lifestyles, they share a common dilemma, which is the physical need to interact with the host plant,
thereby generating wounds and releasing components from the plant surface, which allow the plant to recognize the invasion (van’t
Slot et al., 2007). The recognition in this matter are facilitated by protein-protein interactions, which are important factors in the
regulation of molecular and cellular mechanisms responsible for both healthy and diseased states of host organisms (Yakubu et al.,
2019). Plants are able to resist infection through highly effective and robust means of repelling or being colonized by the majority
of pathogens and pests they encounter (Kettles ei al., 2016). Diseased state of the plants is an outcome of three way interactions
among pathogen, host and the environment, where every component of the interaction is presumed to be in favour of the pathogen
(Sharma et al., 2014). The following under are reactions of banana genotypes upon being infected by pathogens under favorable
environmental conditions.
1.2.1. Susceptible reaction
Susceptible (compatible) reaction occurs when a pathogen is able to enter the host tissues and being able to establish nutritional
relationship, which results in increased multiplication and movement of the pathogens in the host tissues and to other plants. In a
compatible plant/microbe interactions, adapted microorganisms have means to avoid or disable this resistance response and promote
virulence (Wiesel et al., 2014).Pathogensmust evolve mechanisms to overcome the multi-layered plant immune system (Kettles et
al., 2016), adaptation and possession of several factors that allows pathogens to infect variety ofplant by suppressing plant defense
mechanisms ranging from passive barriers to induced defense reactions (Gohre and Robertzek, 2008’ Toruno et al., 2016). Allowing
a constant nutrientssupply from host’s roots, xylem or phloem vessels, leaves, flowers, or fruits to the pathogens (Toruno et al.,
2016).This is achieved by secreting effector protein molecules of different types into plant cells to interfere with individual defense
responses (Gohre and Robertzek, 2008). A susceptible host normally shows significant reduction in growth and performance which
is associated by symptom expressions or signs on the host.
1.2.2. Tolerant reaction
1.2.3. Resistance (immunity) reaction
“Immunity" refers to physiological state of having sufficient biological defenses to avoid infection, disease or unwanted biological
invasion (Majia-Teinente et al., 2010). Upon infection a host resistant protein (R-protein) may react incompatibly with effector
protein from the pathogen in the case of resistance genotypes. Incompatible reactions occurs when a suspected host prevent the
development of disease by stopping multiplication and movement of the pathogen with the host. This result in no symptom or signs
development and, growth and development of the suspected host is not affected at all. Plants utilize a variety of strategies to defend
against pathogen attack. One strategy is to strengthen the cell wall, thereby making a barrier between the plant cell and the pathogen
(Richter and Ronald, 2000; Jin and Yin, 2019). For example, enzymes involved in lignin and callose biosynthesis are induced upon
pathogen attack. A second strategy the plant utilizes is the production of antimicrobial compounds, such as toxic secondary
metabolites, and hydrolytic enzymes (Richter and Ronald, 2000; Jin and Yin, 2019).
Plants possess large arsenals of immune receptors capable of recognizing all pathogen classes (Toruno et al., 2016). When a
pathogen successful penetrate the host need to persist within the apoplastic space (Gohre and Robertzek, 2008). To the other hand
plant utilizes the bilayer-innate immune response that involves a combination of localized plasma membrane and intracellular
receptors (Selin et al., 2016).
The first layer consists of the recognition of evolutionarily conserved pathogen or microbe associated molecular patterns (PAMPs
or MAMPs) by pattern-recognition receptors (PRRs). The immune receptors possessing extracellular domains, such as receptor-like
proteins (RLPs) and receptor-like kinases (RLKs), these are capable of recognizing conserved microbial features and eliciting
pattern-triggered immunity (PTI) (Wiesel et al., 2014; Selin et al., 206; Toruno et al., 2016).
The second layer is effector-triggered immunity (ETI) consists of the direct or indirect recognition of effectors by intra-cellular
disease resistance (R) protein (Toruno et al., 2016).The intracellular immune receptors possess nucleotide-binding (NB) and leucinerich repeat (LRR) domain architecture (Wiesel et al., 2014; Selin et al., 2016; Toruno et al., 2016). These receptors specifically
recognize pathogen effectors or effector activity, leading to the induction of effector-triggered immunity (ETI) (Toruno et al., 2016).
3941 *Corresponding Author: Kennedy Elisha Jomanga
Volume 05 Issue 10 October 2022
Available at: ijcsrr.org
Page No.-3939-3953
International Journal of Current Science Research and Review
ISSN: 2581-8341
Volume 05 Issue 10 October 2022
DOI: 10.47191/ijcsrr/V5-i10-17, Impact Factor: 5.995
IJCSRR @ 2022
www.ijcsrr.org
Breeding for genetic resistance in crops is a foundation of disease management in agriculture (Elizabethlof et al., 2017). The arising
of resistance-breaking pathotypes or strains of pathogens in crop production systems (Peressotti et al., 2010), combined with the
low genetic base banana has (Waniel et al., 2021), increases the risks of the resistance genes being defeated. When resistance is
broken in a cultivar, growers adopt varieties with new resistance genes, resulting in a “boom and bust” cycle (Elizabethlof et al.,
2017). The causes of broken resistance in crops is the result of both natural and anthropogenic sources, here under is a brief
discussion on why broken resistance occurs.
2.0 WHY BROKEN RESISTANCE
The survivability of most organisms in varied environmental conditions depends on the presence of general resistance mechanisms,
conditioned by inbuilt genetic system to maintain those (Sharma et al., 2014). Therefore individuals with genes that improve their
survival will be more likely to pass along these genes compared to the rest of the population. Plants have evolved sophisticated
mechanisms to perceive pathogen invasion whereby there is direct interaction guided by gene for gene model and indirect interaction
guided by guard model (Sharma et al., 2014). These modes of recognition leads to co-evolutionary dynamics between plant and
pathogens in different environments (Mejia-Teniente et al., 2010). This lead to both plant and pathogen to be in a life time tag of
war and the one which is capable evolving fast will benefit. In many literatures micro-organisms, the pathogen due to their size are
cited to be evolving faster than plants, this give them benefit of not being recognized by previously resistant plants.
2.1. What causes broken resistance in banana and plantains
There are several factors that contributes to broken resistance in banana and other crops.
2.1.1. Current agricultural cropping strategies rely primarily on the rotation of one cropping genotype over a large
areas of land, this exerts selection pressure to the pathogens (Selin et al., 2016). In some cases, resistance can be
broken down even when it was deployed in a limited acreage dominated with monoculture, this is particularly a
problem in modern agriculture (He et al., 2021). Pathogen reproduction tends to be host-frequency dependent
when particular crop species or genotypes are very common. As a result, when susceptible genotypes of a
particular species are present at higher frequency, covering a higher proportion of agricultural land, losses to
disease for that species will tend to be higher (Garrett and Mundt 1999).
2.1.2. Use of chemicals these promotes selection of pathogen isolates capable of overcoming crop resistance (Selin et
al., 2016). Repeated use of the same class of pesticides to control a pathogens cause undesirable changes in the
gene pool of a pest or pathogen, through this process of selection, the population gradually develops resistance
to the pesticide.When host resistance is unavailable or insufficient to suppress disease epidemics, fungicide
application becomes inevitable. In the philosophy of free-disease agriculture currently adopted worldwide,
fungicides are often overused to guarantee crop yield and quality, particularly for vegetable and ornamental
productions in developed regions (Selin et al., 2016).
2.1.3. Multiple-infections or disease complex involves pathogens, nematodes and insects damages have been reported
to cause broken resistant in previously reported pathogen resistant cultivars (Mwangi, 2008). For example a
banana cultivars resistant to fusarium wilt lost its resistant to fusarium wilt disease causing pathogen when
nematode first infect the roots of this cultivar (Mwangi, 2014).Nematode wounding damage has also been found
tobe fundamental to several other disease complexes (Back et al., 2002).Synergistic interactions of nematodes
and other pathogens can be positive where an association between nematode and pathogen results in plant
damage exceeding the sum of individual damage by pest and pathogen (Back et al., 2002). Under such condition
if the banana was resistant to a certain disease causing pathogen then, there is a big possibility of broken resistant
phenomenon to occur.
2.1.4. Narrow genetic base of banana and plantain (Waniel et al,, 2021; Hinge et al., 2022), is a limitation on the
diversity of the bred and released resistant cultivars. Since banana and plantain are mainly propagated
vegetatively there are no recombination that occurs.This challenge reported led many banana cultivars to be
easily succumbed to variety of ever genetically evolving pathogens (Hinge et al., 2022). Under such a
circumstances it is easy for resistant banana cultivars to lose its resistant nature due to pathogen pressure and
3942 *Corresponding Author: Kennedy Elisha Jomanga
Volume 05 Issue 10 October 2022
Available at: ijcsrr.org
Page No.-3939-3953
International Journal of Current Science Research and Review
ISSN: 2581-8341
Volume 05 Issue 10 October 2022
DOI: 10.47191/ijcsrr/V5-i10-17, Impact Factor: 5.995
IJCSRR @ 2022
2.1.5.
2.1.6.
2.1.7.
2.1.8.
2.1.9.
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this is also threatening cultivated banana in the world. It is reported by Bakry et al., (2009), there is possibility
of disappearance of banana culture due to the emergence of new diseases is high.
The nature of interaction between resistant genes and the pathogen avirulent genes. Pathogen and plant genes
involved in gene for gene model of direct interaction are subject to different evolutionary forces and since
virulence is recessive (Richter and Ronald, 2000). A small loss of-function mutation in the avirulence gene of
the pathogen allows it to become virulent on the host (Richter and Ronald, 2000). So loss in resistance is expected
fast than where there is indirect interaction. For example vertical (gene for gene-few genes) resistance is near
complete but can be easily evaded due to the continuous evolution of pathogens, leading to rapid breakdown of
resistant varieties after they are released for commercial utilization (Carlier et al., 2021; He et al., 2021).
Horizontal resistance which involves many genes, is incomplete and often requires additional disease control
approaches to ensure better harvest but is more durable compared to vertical resistance due to the minor and
accumulative contribution of each gene to the resistant phenotypes (He et al., 2021).
Pathogen possession of expanded genome, transposable elements and dispensable chromosomes have been
reported to aid adaptation and increased vilurence of many pathogens leading to broken resistance in the
suspected host (Arango et al., 2016; Friesen, 2016; Noar et al., 2022). It has been shown that transposable
element induce gene alterations,can cause resistance gene inactivation and diversification (Richter and Ronald,
2000). A good examples are reported in maize and banana that insertion or inversion of transposable element
disrupted genes that confer resistance to diseases (Arango et al., 2016; Richter and Ronald, 2000). Plant
pathogens can adapt to quantitative resistance, eroding its effectiveness (Carlier et al., 2021). Adaptability is
governed by the genetic flexibility of the pathogen population and its reproductive efficiency. The mechanisms
underlying the adaptation of pathogen populations to xenobiotics and to plant R genes are basically the same: in
both cases, pathogen fitness is reduced, and the pathogen evolves in response to this selection pressure (DjidjouDemasse et al., 2017).
Recombination in sexually reproduced pathogens result in high recombinants that facilitates the exchange of
genetic material, this helps pathogens to adapt to changing environments and adapt to new host easily (Zhan et
al., 2007). So sexually reproduced pathogen produce new strain/isolate which might be challenging to the
released resistant cultivars. An advantage of sex to the pathogen is that new combinations of genes can come
together through recombination each generation, leading to a high degree of genotype diversity that may enable
some component of the pathogen population to survive in a threatening environment (McDonald and Linde
2002).It was concluded by Zhan et al. (2007), that sexual reproduction facilitates the evolution of parasites to
overcome host resistance.
Climate change scenarios, the continued survival of most organisms depends on the presence of specific genetic
systems to maintain diversity in the face of a changing environment (Yáñez-López et al., 2012; Burdon and
Zhan, 2020). The effect of climate change on the profile or quantity of effector molecules are obvious due to the
fact that, effectors are proteins(Yáñez-López et al., 2011). Plant diseases, both endemic and recently emerging,
are spreading and exacerbated by climate change (Ristaino et al., 2020).Of greater concern may be the expected
increase in climatic variability (IPCC, 2012), which could increase the number of diseases and pests of
importance in a given locality, as well as the yearly fluctuations of their prevalence (Mundt, 2014).The climate
influences the incidence as well as temporal and spatial distribution of plant diseases (Yáñez-López et al.,
2012).Fluctuations in rainfall patterns and temperature can induce severe epidemics in plants because some types
of pathogens will be favored by the changes (Rosenzweig and Tubiello, 2007). This can accelerate mutation or
favour recombination of pathogens ultimately increased fitness of the pathogens.
Gene flow results in producing new strains that might be a source of broken resistance in released resistant
cultivars. Gene flow is a process in which particular alleles (genes) or individuals (genotypes) are exchanged
among geographically separated populations of pathogens. For strictly asexual organisms that do not recombine
particular genes with the recipient population, entire genotypes are exchanged among populations and we will
refer to this process as genotype flow (McDonald and Linde 2002).In spite of the absence of a sexual
3943 *Corresponding Author: Kennedy Elisha Jomanga
Volume 05 Issue 10 October 2022
Available at: ijcsrr.org
Page No.-3939-3953
International Journal of Current Science Research and Review
ISSN: 2581-8341
Volume 05 Issue 10 October 2022
DOI: 10.47191/ijcsrr/V5-i10-17, Impact Factor: 5.995
IJCSRR @ 2022
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reproductive cycle, some pathogens have high potential to develop new pathotypes by asexual means such as
mutation, heterokaryosis and parasexualism (Djidjou-Demasse et al., 2017).This is reported to increase fitness
of pathogens therefore increasing its ability to outfit resistances of suspected host.
2.1.10. Mutation is the ultimate source of genetic variation, directly leading to changes in the DNA sequence of an
individual gene and thus creating new alleles in populations. Populations with more alleles have greater gene
diversity than populations with few alleles. Mutation is the process that creates new virulent strains of plant
pathogens that break major gene resistance (McDonald and Linde 2002). If the resistance was based on a single
R gene, a single mutation event at the corresponding Avr locus would result in a new virulent pathotype causing
the resistance to ‘bust (Pink and Hand, 2002). Several models have been developed to examine how negative
effects of disease on host fitness select for the evolution of resistance and how negative effects of resistance on
parasite fitness select for the evolution of virulence (Simms, 1996). The number of mutations required for
virulence acquisition was another parameter related to resistance durability by Harrison (2002). He compared
the relative durability of resistance in several plant-virus pathosystems and showed that the more mutations are
required for virulence, the more durable was the resistance.
2.1.11. Introduction events also present a window of evolutionary opportunity for the pathogens. Plant disease epidemics
resulting from introduction of exotic fungal pathogens are a well-known phenomenon (Braisier 2001). Limited
resistance in the host and excessive aggressiveness in the pathogen (reflecting their lack of prior coevolution)
can result in an explosive outbreak of disease (Braisier 2001).
2.1.12. Another important factor is genetic background, which refers to the presence or absence of quantitative trait loci
(QTLs) that are responsible for disease resistance. The presence of QRLs have been shown to protect major
resistance genes from breakdown in viral, fungal and nematode pathosystems (Palloix et al., 2009). The
mechanism underlying the QRLs enhanced durability of major resistance gene showed that QRLs increase the
number and affect the nature of mutations required to break resistance (Quenouille et al. 2013).
3.0. WHY INVEST IN MINIMIZING THE CHANCES OF BROKEN RESISTANCE
Despite the fact that disease resistant cultivars have been successfully used for disease control (Leach et al., 2001). Several Scientists
including Breeders, Genetists and Researchers sight resistance genes as a limited and potentially non-renewable resource (Leach et
al., 2001; Lo lacono et al., 2013). So once a pathogens has evolved to overcome the resistance in the cultivars, the resistance genes
have permanently lost their value in breeding (Leach et al., 2001; Lo lacono et al., 2013). In actual fact released cultivars are obtained
through tidies activities which involves travelling within and without the countries, communicating, conducting/seating in endless
meetings. While the actual process of introgression of resistance genes is one of the sleepless activities in research. All and others
uses a lot of funds from Donors, brain etc. It also has long known that the development of disease symptoms is not solely determined
by the pathogen responsible, but rather the complex interrelationship between host, pathogen and prevailing environmental
conditions (Back et al., 2002). This calls for management of interrelated factors that influences development of a disease in the
agricultural system. Here under is the discussion of why should we protect the released cultivars against losing their resistance to
diseases.
3.1. Time taken for breeding banana cultivar
Banana breeding program is a time-consuming process that involves huge manpower to complete the breeding procedures, which
makes it cumbersome in tracking the status of hybridization details (Kumar et al., 2020). It takes 15 to 20 year for a banana hybrid
to be obtained whereas for other crops like cereals and legumes it takes 2 to 3 years.Improvement of edible bananas through
conventional breeding is a challenging task owing to its recalcitrant nature for seed set, prolonged crop duration (Kumar et al.,
2020). In addition, the need of huge man power at different stages of progeny development and evaluation.
3.2 Nature of resistant genes possessed by the host plant
The knowledge on the quality and durability of resistance for both vertical (qualitative resistance) and horizontal resistant
(quantitative resistance) are not known. It been proved that some resistance in some cultivars controlled by few major genes are
durable resistant while many others lose their resistant easily (Lo lacono et al., 2013). Similarly with resistance in some cultivars
3944 *Corresponding Author: Kennedy Elisha Jomanga
Volume 05 Issue 10 October 2022
Available at: ijcsrr.org
Page No.-3939-3953
International Journal of Current Science Research and Review
ISSN: 2581-8341
Volume 05 Issue 10 October 2022
DOI: 10.47191/ijcsrr/V5-i10-17, Impact Factor: 5.995
IJCSRR @ 2022
www.ijcsrr.org
controlled by many minor genes have been reported to be durable and not in others with similar nature (Lo lacono et al., 2013). This
brings a lot of confusion in breeding since there no anymore trusted genes sources to assure breeders with durable resistance. Then
the whole breeding process of selecting parents for crossing becomes a probability.
3.3. Cost of breeding
Funding for banana and plantain breeding basically depends on donors, in developing countries there no many governments that
have devoted their resource to fund breeding banana and plantains programs. This is possibly because of the banana nature which
is dominated by long life cycle and sterility which does not assure of quick returns from breeding programs. As it have been
mentioned above it takes 15 to 20 years of funding banana breeding program activities for it to give out a new hybrid. This long
time awaiting with the challenge of broken resistant ends up in a serious pain to farmers, breeders,
3.4. Complexity related to biology and introgression
Breeding banana is a difficult exercise due to complexities resulting from parthenocarpy, sterility, polyploidy and vegetative
propagation (Nansamba et al., 2020). The low fertility and seed germination of cultivated bananas is a handicap for breeders (Bakry
et al., 2008). The physiological and reproductive barriers like low pollen, poor receptacle stigma etc. possessed by the plant itself is
the serious limitation in breeding (De Langhe et al., 2008; Brown et al., 2017).Seed production is very limit due to the above and
the germination of the few viable seeds are affected by several other factors.Seed yield is influenced by time of pollination,
environmental conditions, genetic variation in female fertility, differences observed among pollinations made between the basal and
distal hand, and variation associated with the relative contributions of the acuminata and balbisiana genomes (Simmonds 1962).This
makes breeding banana unique, the uniqueness lies in the fact that in banana which is almost sterile, raising sexual progeny in
sufficient numbers to combine desirable characters and at the same time resulting in another sterile plant is indeed very difficult.
Fertilization in banana does not involve the usual processes of reduction division on both sides, re-assortment and segregation of
gene complexes, giving only a remote chance of success, as practice has confirmed (Bakry et al., 2008). Simmonds (1962), proposed
that continuous clonal propagation of diploids has led to an accumulation of structural chromosomal changes that restrict normal
meiosis and pollen fertility and reduce expected recombination.
3.5. Effect of climate change
Climate change triggers effects on the incidence and severity of disease for crops in agriculture and wild plants in natural
communities (Burdon and Zhan, 2020). From an agricultural point of view, these changes have major implications for the geographic
temporal and spatial distribution of crops and their associated pathogens and the extent and reliability of production (Yáñez-López
et al., 2012; Burdon and Zhan, 2020).The environment may affect plant pathogen, therefore, survival, vigor, rate of multiplication,
sporulation, direction, distance of dispersal of inoculums , rate of spore germination and penetration can be affected (Yáñez-López
et al., 2012). Changes in the fate of an individual pathogen species an increase or a decrease leading to local extinction or may be
surpassed by consequent increases or decreases in host fitness, generating “knock-on” effects in the structure of whole plant
communities (Burdon and Zhan, 2020). This implies that the effects of climate change on pathogens evolution is a continuous
process and fast while banana breeding is moving at a slow pace. There is a need to adopt means to minimize the effects of climate
change impact on resistant cultivars to elongate the durability of resistance in our precious cultivars. Otherwise broken resistance
gene will continue to affect our released cultivars continuously.
3.6. Technical challenges
Plant breeding is a vital agriculture industry that needs to be fostered, stimulated and technology amalgamation in this area can act
like an incubator for scalable improvement (Tiwari, 2017).Researchers and farmers essentially require authentic high-yielding
cultivars to maximize the output and traditional methods based on the phenotypic selection are complex and irreproducible to
identify authentic cultivars (Hinge et al., 2022).In developing countries the use of technologies like tissue culture, mutagenesis,
gene-sequencing,gene editing, interspecific or inter-generic hybridization, genetic modification, marker-assisted selection (MAS),
disease diagnostics and bio-protection for crop improvement have not been widely used.And whenever such technologies are used
lack of equipped laboratories and technical staffs are major challenge that face banana breeding in developing countries. As the
result of these, developing countries banana breeding research depends sole getting services from developed nations for their
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services, this makes breeding highly expensive. This reflects on how important our released cultivars are so precious need to be kept
and protected.
3.7. Banana sources of resistance challenge
Many sources of resistance to diseases in banana and plantain are still not well understood as the result of that breeding becomes
like gambling. We have not accumulated enough information to know the best males to use in breeding for resistance, which its
resistance quality and durability is well elucidated. This creates complexity in terms of breeding plan and results expected is not
sometimes assured. So losing banana cultivars resistant to diseases in breeding banana fis very painful excise that needs research
attention. There are several researches which have been undertaken and are ongoing to unveil the hidden behaviors that makes genes
durable resistant to diseases in banana.
3.8. Lack of loyalty among scientist/Researchers
Broken resistance is the serious enemy of loyalty among banana stakeholders, this calls for quick intervention to maintain loyalty
among researchers and the community we save.According to Woodruff, (1997), customer loyalty can be considered to be the source
of a competitive gain, as it has a substantial influence on enterprises’ performance. For this case farmers are the customers of all
banana breeding programs and our performances depends on our customer’s loyalty to the product we give to them. So the better
the resistance of the released banana cultivars has a positive influence on the loyalty between Breeders/ Researchers and the Farmers.
This calls for Breeders and Pathologists in general to be virtue in what is said to be resistant should be resistant and not otherwise,
to keep the breeding legacy uplifted.
3.9. Long durability requirement in banana and plantains
Durable resistance is the adequacy of the resistance throughout the useful lifetime expected from a variety. This may vary according
to the cycle of varietal replacement in a plant breeding program. Thus, the time requirement for durability for some vegetable crops
with a high variety turnover may be less than that needed for cereals (Leach et al., 2001).For crop like banana due to the life cycle
of the plant together with complications brought by introgration of resistant gene into a new cultivars replacement of a variety is
longer than any other major crop known. Therefore protection a variety from broken resistant is a fundamental thing with banana
and plantain production.
3.10. Life cycle of banana and plantain
Depending on the cultural conditions, the duration of the cycle of banana and plantain is a varietal characteristic that is subject to
wide variations. It ranges from 9 to 18 months, according to the variety, which is relatively critical in terms of the production
potential of banana plantations. For this sake yield assessment research takes time to complete with a lot of complexity interms of
data analysis due to variation in time of maturity. To release a variety is bound to delay due to this complications associated with
the life cycle of banana and plantain.
3.11. Protection of environment and biota
Food demand is growing fast due to increase in human population whereas food production is growing at decreasing rate, this calls
for production increase. This food production increase should adhere to national and international agreed protocol of conserving the
environment and the biodiversity. So the use of chemicals and other hazardous practices to control pathogens need to either to be
regulated or stopped to save the biota.
3.12. Acceptable method of breeding
Conventional banana breeding that involves manual pollination is the only acceptable method of breeding in many developing
countries. The method is face with a lot of challenges like sterility of banana and plantains, polyploidy nature of banana that hinders
meiosis process in many banana genotypes, long regeneration time and complexity related to evaluation at different levels. All these
reasons and other contributes slowing of the breeding of banana without alternative. Rapid technique like the use of genetically
modified banana, mutation breeding etc for improved diseases resistant are either acceptable for research purposes under confined
environments or not at all. This is leading to many research programs to focus on conventional breeding.
3.13. Variety/cultivar preferences
Breeders and Pathologists in their areas of specialization have tried to focus on improving resistance to disease and yield in banana
and plantain. Many genotypes have proved to meet the objective of improved yield and diseases resistance. But there have been a
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danger of eventual failure if proper consideration of whether or not it satisfies a user/consumer need. Therefore very few cultivars
meet these requirements of release out of hundreds of hybrids produced during breeding program. This have serious cost implication
that a thousand or hundreds hybrids are produced sometime one qualifies. This calls for endeavors to protect these few cultivars that
qualifies, otherwise the whole tiresome and expensive will end in a serious loss to the program if broken resistance occurs.
4.0. HOW CAN WE PRESERVE RESISTANT CULTIVARS
Minimizing risk of broken resistance in banana and plantain is crucial for sustainable banana production ultimate increased yield. It
is reported that inherent quality and durability of a plant resistance gene is a direct function of the amount of fitness penalty imposed
on the pathogen (Leach et al., 2001).The most durable resistance genes are those that require multiple mutations from the pathogen
for virulence, with mutations causing the highest fitness penalty (Palloix et 2009).Therefore enhancing durability of crop resistance
to plant pathogens is the key goal of virulence management in crop production (Lo Iacono et al., 2013). It is reported that once the
resistance genes have been introduced into plant varieties, their efficacy can be preserved only by manipulating external factors
(Consortium, 2016). It is emphasized that durability of resistance is not merely a property of gen es; it is the property
of the cropping system (Adugna, 2004). Despite the recognition of the importance and effects on the evolution of the pathogen
and durability of resistance gene, there is less attention paid to these important aspect of crop improvement (Lo Iacono et al., 2013).
In banana and plantain durability of a cultivar for the practical purpose is longer compared to other crops like cereals and vegetables
which are easily replaced by new released varieties. The following are some of the important aspects to be included in the course of
banana and plantain breeding and production for sustainable yield.
4.1. Redefining the breeding objectives
Breeding for resistance should not be the only goal of breeding program,but the objectives should further identify the factors that
govern quality and durability of resistant gene in resistant cultivars. Since it have been reported that qualitative resistance is generally
regarded as “short-lived,” because the effect of the R gene is essentially neutralized by loss of the corresponding avirulence gene
function in the pathogen (Lo lacono et al., 2013). Again quantitative resistant is regarded as incomplete need to be supplemented by
other agronomic practices to make it durable (Lo lacono et al., 2013). Though report by Leach et al., (2001) explain that there many
examples of resistant genes controlled by major gene which have been resistant for 30 t0 90 years. This implies that breeding for
resistant should not be the only goal to achieve but rather identifying the factors that govern the quality and durability of the resistant
genes. Contrary to all these Palloix et al., (2009), commented that polygenic resistance proved more durable than monogenic, but
breeding strategies give priority to major resistance, this jeopardize the progress in durability expected from polygenic
resistance.Need for further research to improve breeding objective for better cultivar resistance.
4.2. Mode of deployment of resistant cultivars
The integration of new species and traits in cropping systems must be accompanied by recommendations on how to deploy them so
that the expected resistance are effectively provided (Lamichhane et al., 2018). If a cultivar deployed uniformly in the field,
genetically controlled plant resistance is often quickly overcome by pathogens, resulting in dramatic losses (Rimbaud et al., 2018).
Several strategies have been proposed to constrain the evolutionary potential of pathogens and thus increase resistance durability
(Mundt, 2014; Rimbaud et al., 2018).These includes the following strategies that helps to reduce diseases effects by increasing
resistance durability in agricultural system.
a). Resistant gene rotations , that is recurring succession of different crop cultivars in the same field.Temporal gene deployment
may include 1) sequential release of resistance genes where by each variety is used until populations reach the
breakdown population level and is immedia tely replaced by another variety. 2) Variety rotations from season to
season or recycling of resistance genes. Rotation of varieties with different resistances prevents selection of
compatible isolates in populations of soil-borne pathogens. According to Harahap and Silitonga (1988), gene
rotation can be effectivein areas of intensive agricultura l production where there are adequate and intensive disease
surveys in collaboration with plant breeders (Elizabethlof et al., 2017).
b). Gene pyramidingthat is different resistance sources/genes,this is done by providing a wide array of horizontal resistance
cultivar (Mundt, 2019; Ramalingam et al., 2020). In some areas although a single gene confers resistance to the existing
pathogen population, the large-scale use of this gene results in the breakdown of resistance (Adugna, 2004).To delay
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such breakdown, pyramiding of more than one resistance gene is effective. Gene pyramids are expected to
considerably extend the durability of resistance because of the low probability for the pathogen to assemble multiple,
rare virulence genes by mutation and/ or recombination (Adugna, 2004; Elizabethlof et al., 2017).
c). Cultivar mixtures that is different cultivars combined in the same field. This refers to a homogeneous, spatial mixture of
different genotypes of one plant species in a field. According to Burdon (1993), the concept of mixtures is to shield
individuals carrying one particular resistance with a range of others carrying other resistan ce genes. Disease
resistance in variety mixtures depends on slowing down the development of the best -adapted race on each
component. Mechanisms by which disease reductions are obtained in mixtures include a decrease in susceptible
tissue and therefore a decrease in inoculum potential within the mixture, an increase in distance for spores to move
from one susceptible plant to another, the physical barrier of resistant plants and possibly cross -protection whereby
the defensive mechanisms of one component of t he mixture may be activated by an a virulent isolate from another
component (Garret and Cox, 1999). Plant genotypes selected for agricultural mixtures should be chosen to exhibit complementary
growth traits, as well as complementary resistance characteristics. In a mixture of cultivars with different resistant genes, pathogens
are restricted to susceptible hosts and spore losses on resistant plants results in considerable reduction in disease severity (Lannou
2001). A resistance gene deployed in a mixture will have less exposure to the pathogen population than if the same gene was
deployed in monoculture of the same total crop area (Lannou 2001; Elizabethlof et al., 2017).
d). Mosaics that is different cultivars in different fields of a continuous landscape (Rimbaud et al., 2018).Strategies to improve plant
resistance management rely on careful selection of resistance sources and their combination at various spatio-temporal scales. The
land scape is a dynamic mosaic of fields cultivated with crop types .Eachcrop type is composed of either a pure cultivar or a mixture
and each cultivar may carry one or several resistance genes. Each resistance gene targets one or several pathogenicity traits, with
complete or partial efficiency and maybe expressed from the beginning of the season or later. For two R genes (R1 and R2) deployed
in an agricultural landscape, the simplest mosaic strategy consists of the repeated planting, over cropping seasons, of half the field
with a cultivar bearing R1 and the other half with a cultivar bearing R2 (Djidjou-Demasse et al., 2017).
To conclude the above, Rimbaud et al., (2018), according to him four strategies above offered the same short-term epidemiological
control, whereas rotations provided the best long-term option, after all sources of resistance had broken down. Acoording to DjidjouDemasse et al. (2017), strategy performance depended principally on the fitness costs of adaptive mutations, epidemic intensity
before resistance deployment and landscape connectivity. Mosaics were at least as good as pyramiding strategies in most production
situations tested. This is calling for Breeders and Researchers to have ready many cultivars with different levels and sources of
resistance released so that they can be used in case acultivar lose its resistance. This is to ensure farmers have sustainable production
to feed the growing populations
4.3. Combining the different management methods that aim in reducing amount of inoculum
It seems logical that integrated management has the potential to increase the durability of resistance as compared to using the same
resistance in a non-integrated manner (Mundt et al., 2002). Individual control measures used alone often bring only small benefits
and may become ineffective in the long term. When control measures that act in diverse ways are combined into integrated disease
management tactics, their effects are complementary resulting in far more effective overall control (Makkouk et al.,
2014). Optimization is done of all possible measures that operate in different ways such that they complement each other and can
be applied together in farmers’ fields as one overall control package ((Jones, 2004; Thresh, 2003). Each strategy needs to be
affordable by farmers and fulfill the requirements of being environmentally and socially responsible. It must also be compatible
with control measures already in use against other pests and pathogens (Makkouk et al., 2014).This would thus decrease the
probability that a resistance-breaking genotype will be present in the pathogen population. In addition, combining management
practices may present the pathogen population with multiple barriers to overcome (Mundt et al., 2002).
4.4. Imposing and strengthening laws and regulations that restrict movement of infected agricultural plants and their
products within and outside the countries.
Plant quarantine is one of the very important procedure that helps in minimizing problem related to diseases occurrence. It involves
legal enforcement of the measures aimed to prevent pests from spreading or to prevent them from multiplying further in case they
have already gained entry and have established in new restricted areas.Prevent the introduction of new pests from foreign countries,
3948 *Corresponding Author: Kennedy Elisha Jomanga
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prevent spread of already established diseases from one part of the country to another. Legislation to enforce farmers to apply
effective control measures to prevent damage by already established pests and prevent the adulteration and misbranding of
pesticides. Laws are enacted to allow the determination of permissible residue tolerance levels in food stuffs and regulate the
activities of people engaged in pest control operations and application of hazardous chemicals.
Therefore different countries on the earth they are urged to enact laws and regulation that will regulate the movement of plant
materials within and outside by preventing or restrict infected materials to get into their country.
4.5. Increasing loyalty and integrity of researchers, breeders and pathologists
Breeders, Researchers and pathologists need to be virtue, that is strive towards living in compliance with one’s full potential,
intellectually as well as following good moral conducts in order to achieve goals set by the breeding program. According to Aristotle
virtue as ‘the state of character which makes a man good and which makes him do his work well (Ross and Brown, 2009). It is
important to adhere to values and norms which are core concepts in moral reflection about research integrity.A breeding program is
the sum of breeding pipelines to achieve breeding targets for a set of market/target segments.Any pipeline should have a clear
deliverable/product to be handed at the end of the pipeline and a clear customer that is a target population of environments in which
the final product is to be grown. Must have a clear descriptions on the target clients and product traits that are valued for production
and consumption. Scientists in general need to optimize the plant genotype, by choosing the most promising resistance genes and
gene combinations regarding the durability of resistance. If all the proper procedures, regulation and rules are followed there is high
chances of obtaining excellent product from research.
5.0 CONCLUTION AND RECOMMENDATION
The use of integrated approaches by including host plant resistance into a crop management system can help to achieve a durable
crop resistance phenotype (Pink, 2002). Resistance is a dynamic phenomenon may change over time, therefore continued
monitoring is vital to determine whether management recommendations remain valid or need to be revised in light of changing
circumstances or new knowledge gained. So the need to design breeding in such way to include the use of the released resistant
cultivars is important factor that will help bringing back feedback to breeders early that it is now. We therefore recommend the
following things to be done to help achieving the objective of breeding for durable resistant;
1. Research need to be done to identify the factors that govern quality and durability of resistance in banana, plantain and wilt
banana.
2. Breeding objectives need to go together with the identification of the best agronomic practices that will combine suitably
with the released resistant cultivars. Despite this understanding, the most widely adopted ‘resistance breeding’ strategy
throughout the 20th century remained the production of varieties with single gene (Pink and Hand, 2002).
3. There need for research to test disease resistance gene deployment strategy that will suit different environment to increased
durability.
4. Study on predicting of durability of resistant in banana are not there, there are need to conduct such study to be sure of
product durability.
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Cite this Article: Kennedy Elisha Jomanga, Shija Shilunga Lucas, Ashiraf Rweyemela Mgenzi, Magdalena Gaudence Kiurugo,
Rosemary Frank Simba, Emiliana Biseko (2022). Review on Broken-down Resistance to Diseases and Its Management; the
Hidden Challenge in Breeding and Production of Banana and Plantains in Developing Countries. International Journal of
Current Science Research and Review, 5(10), 3939-3953
3953 *Corresponding Author: Kennedy Elisha Jomanga
Volume 05 Issue 10 October 2022
Available at: ijcsrr.org
Page No.-3939-3953