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New ruthenium(II) bipyridyl complex: Synthesis, crystal structure and cytotoxicity
J. Serb. Chem. Soc. 82 (3) 267–275 (2017)
JSCS–4964
UDC 546.962+547.828:548.7+
54–77:66.094.1+57.01
Original scientific paper
New ruthenium(II) bipyridyl complex: Synthesis, crystal
structure and cytotoxicity
AFYA A. BAROUD1, LJILJANA E. MIHAJLOVIĆ-LALIĆ2, DALIBOR STANKOVIĆ2,3,
MARIJANA KAJZERBERGER4, KRISTOF VAN HECKE5, SANJA GRGURIĆ-ŠIPKA1*
and ALEKSANDAR SAVIĆ1**
1Faculty of Chemistry, University of Belgrade, Studentski trg 12–16, Belgrade, Serbia,
2Innovation Center of the Faculty of Chemistry, Studentski trg 12–16, Belgrade, Serbia, 3The
Vinča Institute of Nuclear Sciences, University of Belgrade, P. O. Box 522, 11001 Belgrade,
Serbia, 4Institute for Oncology and Radiology of Serbia, Pasterova 14, Belgrade, Serbia and
5XStruct, Department of Inorganic and Physical Chemistry, Ghent University,
Krijgslaan 281-S3, B-9000 Ghent, Belgium
(Received 9 January, revised 18 January, accepted 23 January 2017)
Abstract: A new Ru(II) bipyridyl complex with O4-hydrogenpyridine-2,4-dicarboxylate was synthesized and characterized by IR, NMR and mass spectrometry, X-ray diffraction analysis and elemental analysis. The electrochemical characteristics of the complex were investigated by cyclic voltammetry,
revealing Ru(II)/Ru(III) electron transfer in the positive range of potentials. On
the opposite potential side, multiple partially reversible peaks were dominant,
representing subsequent reductions of the bulky bipyridyl moiety. The cytotoxic activity of the complex was tested in two human cancer cell lines: A549
(lung cancer) and K562 (leukemia) as well as non-tumor MRC-5 cells, by MTT
assays. The IC50 values were > 300 and 177.63±2.28 μM for the A549 and
K562 cells, respectively.
Keywords: metal complex; characterization; X-ray; redox properties; biological
study.
INTRODUCTION
The search for efficient antitumor agents is a topic of prime interest in the
field of medicinal chemistry.1–3 Despite the fact that metal complexes are key-components in the treatment of some tumors, there is currently a lack of suitable
drugs. Novel, more efficient and less toxic substances, capable of treating cancers
are therefore considered highly desirable compounds. While the clinical success
of platinum complexes is indisputable,4,5 due to the many side effects of these
*,** Corresponding authors. E-mail: (*)sanjag@chem.bg.ac.rs;
(**)aleksandar@chem.bg.ac.rs
doi: 10.2298/JSC170109025B
267
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BAROUD et al.
drugs (nerve damage, hair loss and nausea) and cellular resistance, thousands of
new platinum and non-platinum complexes were synthesized, in order to find a
more suitable antitumor drug.6,7 Coordination compounds allow a very diverse
platform for drug design. In addition to various oxidation states of metals, metal
complexes have different geometries and coordination numbers that ensure the
fine-tuning of their chemical reactivity.8,9 Ruthenium compounds are particularly
favored because of their tendency to cause fewer side effects compared to platinum drugs and their physicochemical properties, which include chemical stability and structural diversity.
Ruthenium compounds have shown highly promising biological activity
with the two structurally similar compounds KP1019 and NAMI-A, which are
under evaluation in phase II clinical trials (KP1019 is active against primary cancers whereas NAMI-A is active against secondary tumor cells).8,10–13
Picolinic acid plays an important role as a component of specific enzymes
and as an active agent in a number of drugs. For example, 2,4-pyridinedicarboxylic acid showed immuno-suppressive and fibro-suppressive properties,14
while 2,4-, 2,5- and 2,6-pyridinedicarboxylic acid were included into inhibition
or activation of some metalloenzymes.15,16
Iron(III) complexes with 2,6-pyridinedicarboxylates were synthesized and
their significant role in electron transfer in some models of biological systems
was documented in several papers.17,18 In addition, these molecules were recognized as specific molecular tools in DNA cleavage tests.19
In the last two decades, numerous organo-ruthenium(II) complexes
containing the p-cymene moiety and a pyridine derivative, coordinating in a
monodentate or bidentate manner, were synthesized and their in vitro antiproliferative activity was investigated in the numerous cell lines. The obtained
results indicated that these compounds exhibit moderate antitumor activity with
one complicated mechanism of action, involving extra and intra-cellular processes, which is quite different compared to the classical platinum drugs.20–22
In this work, the synthesis and full characterization of a new ruthenium(II)
bipyridyl complex, [RuL(bpy)2]PF6·0.5H2O (1), where L represents O4-hydrogenpyridine-2,4-dicarboxylate, are described. The antitumor potential of the synthesized compound and its electrochemical profile are also reported.
EXPERIMENTAL
Materials and measurements
All experiments were performed under atmospheric conditions with commercially available chemicals and solvents used as received. In particular, 2,4-pyridinedicarboxylic acid was
purchased from Sigma–Aldrich. The starting complex, [RuCl2(bpy)2] was synthesized according to a previously described, but slightly modified synthetic route.23,24
Elemental analysis was performed on an Elemental Vario EL III microanalyzer. A
Nicolet 6700 FT-IR spectrometer was used for recording the infrared spectrum. The signal
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intensities are reported in wavenumbers and denoted by the following abbreviations: vs = very
strong, s = strong, m = medium and w = weak. An LTQ Orbitrap XL mass spectrometer
(Heated ESI) was used for recording the mass spectra in acetonitrile (HPLC grade) in the
positive mode. The obtained peaks were assigned and interpreted according to the dimensionless mass/charge ratio. The 1H-NMR spectrum was recorded using a Bruker Avance III
500 spectrometer with TMS as the reference. For proton assignments, following abbreviations
were used: (b)s = (broad) singlet, d = doublet, dd = doublet of doublets, t = triplet, q = quartet,
p = pentet, m = multiplet and Ar = aromatic protons. A rough estimation of the melting points
of the compound was realized using an electrothermal melting point apparatus. Analytical and
spectral data of the compound are given in Supplementary material to this paper.
Synthesis of the complex
For the preparation of complex 1, [RuCl2(bipy)2] (100 mg, 0.21 mmol) was dissolved in
ethanol (15 mL) and stirred for 20 min at 40 °C. 2,4-Pyridinedicarboxylic acid (35 mg, 0.21
mmol) was dissolved in a small volume of ethanol (5 mL) and added to the solution of the
starting complex. The reaction mixture was immediately stirred under reflux for 3 h and
afterwards left to cool to room temperature. After the addition of an equimolar amount of
NH4PF6 (33.7 mg, 0.21 mmol), a dark red precipitate was isolated by filtration. The crude
product was washed with a small amount of water and diethyl ether.
Single crystal X-ray diffraction
For the reported structure, X-ray intensity data were collected, at 100 K, on an Agilent
Supernova dual source (Cu at zero) diffractometer equipped with an Atlas CCD detector using
ω scans and CuKα (λ = 1.54184 Å) radiation. The images were interpreted and integrated with
the CrysAlisPro program (Rigaku Oxford Diffraction, 2015).25 Using Olex2,26 the structure
was solved by direct methods using the ShelXS structure solution program and refined by fullmatrix least-squares on F2 using the ShelXL program package.27,28 Non-hydrogen atoms were
anisotropically refined and the hydrogen atoms were refined in the riding mode. Isotropic
temperature factors were fixed at 1.2 times U(eq) of the parent atoms. The hydrogen atoms of
the solvent water molecule and the O4-hydrogenpyridine-2,4-dicarboxylate carboxyl group
were located from a difference Fourier electron density map and restrained refined with
isotropic temperature factors fixed at 1.5 times U(eq) of the parent atoms.
Electrochemical measurements
Electrochemical measurements were performed with a CHI-760B instrument at room
temperature. The voltammetric measurement was performed in a three-electrode cell, which
consisted of a glassy carbon electrode (Model 6.1204.300), an auxiliary platinum electrode
with large surface area (model CHI221, cell top including a platinum wire counter electrode)
and an Ag/AgCl reference electrode (model CHI111). For the purpose of experiments, 1.0
mM solution of the synthesized complex was prepared in DMSO and TBAP was added as a
supporting electrolyte. Cyclic voltammograms for 1 were obtained at 25, 50, 100, 150, 200
and 300 mV s-1.
Cytotoxicity
Reagents and cell cultures. Human alveolar basal adenocarcinoma (A549), human chronic myelogenous leukaemia (K562) and human fetal lung fibroblast (MRC-5) cell lines were
maintained as a monolayer culture in the Roswell Park Memorial Institute (RPMI) 1640
nutrient medium (Sigma–Aldrich). The nutrient medium was supplemented with 10 % heat-deactivated fetal calf serum (FCS, Sigma–Aldrich), 4-(2-hydroxyethyl)piperazine-1-ethane-
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sulfonic acid (HEPES, 25 mM), penicillin (100 units mL-1), streptomycin (200 μg mL-1) and
L-glutamine (3 mM). The cells were maintained as a monolayer culture in tissue culture flasks
(Thermo Scientific Nunc™), in an incubator at 37 °C, in a humidified atmosphere composed
of 5 % CO2.
MTT cytotoxicity assay. The drug-induced cytotoxicity was determined using the 3-(4,5-dimethylthiazol-yl)-2,5-diphenyltetrazolium bromide (MTT, Sigma–Aldrich) assay.29 Cells
were seeded into 96-well cell culture plates (Thermo Scientific Nunc™), in number of 5000
(K562), 7000 (MRC-5) and 8000 cells per well (A549), in 100 µL of culture medium. After
24 h of growth, the cells were exposed to the serial dilutions of the tested agent. Stock
solutions were prepared immediately prior to use by dissolving in dimethyl sulfoxide
(DMSO), so that the DMSO content did not exceed 1 vol. %. The antiproliferative effect of
the complex was evaluated in a range of concentrations up to 300 µM, for 72 h of continuous
drug action. After the treatment, 20 µl of MTT solution, 5 mg mL-1 in phosphate buffer
solution (PBS), pH 7.2, was added to each well. The samples were incubated for 4 h at 37 °C
with 5 % CO2 under a humidified atmosphere. Formazan crystals were dissolved in 100 µL of
10 % sodium dodecyl sulfate (SDS). The absorbance was recorded at a wavelength of 570 nm
using a microplate reader (ThermoLabsystems Multiskan EX 200e240 V) after 24 h The IC50
value (µM) was defined as the concentration of the drug that produced 50 % inhibition of cell
survival, and was determined based on cell survival diagrams.
RESULTS AND DISCUSSION
Synthesis
The main subject of the study was the synthesis and full characterization of a
new ruthenium(II) bipyridyl complex with 2,4-pyridinedicarboxylic acid
(Scheme 1). The obtained compound was air stable and showed no traces of
decomposition.
Scheme 1. Synthesis of the [RuL(bpy)2]PF6 complex.
Spectroscopy
The IR spectrum of the synthesized complex generally revealed an asymmetric stretching vibration located around 1605 cm–1 that originated from the
coordinated carboxylate group. The coordination of the metal center via oxygen
is suggested by comparison to the band of the free carboxylic group at ≈1700
cm–1 in the spectrum of the ligand. The intensive band found at 840 cm–1 was
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assigned to C–H stretching modes. In the ESI-MS spectrum of the complex
recorded in acetonitrile, the [M+–PF6–] signal was detected.
In the 1H-NMR spectrum of the complex, all the aromatic protons were
detected in the range of 7.39–8.84 ppm, which belong to aromatic protons originating from the pyridine and bipyridine moieties. Carboxylic protons were not
detected because the co-ligand was coordinated to ruthenium through the oxygen
atom of the carboxylic group in position 2 of the pyridine ring, while the carboxylic group in position 4 was deprotonated in DMSO.
Crystal data for compound
Compound 1 crystallized in the centro-symmetric space group P21/n, with
one [RuL(bpy)2]PF6 complex in the asymmetric unit, together with one water
solvent molecule (Fig. 1). The Ru(II) ion is octahedrally coordinated by four nitrogen atoms from the two bipyridine ligands, and one nitrogen and one oxygen
atom from the O4-hydrogenpyridine-2,4-dicarboxylate. In fact, while the coordinating carboxyl group in position 2 of the 2,4-dicarboxylic acid ligand is deprotonated, the other carboxyl group in position 4 is clearly protonated. The Ru(II)–
–Nbpy distances are in the range of 2.031(4)–2.055(4) Å, while the Ru(II)–NL
and Ru(II)–OL distances are 2.049(3) Å and 2.090(3) Å, respectively. The
N–Ru–N/O angles vary between 79.07(13)° and 99.05(13)°.
Fig. 1. Asymmetric unit of the crystal structure of 1, consisting of one [RuL(bpy)2]PF6 complex and one water solvent molecule, with atom-labeling scheme of the heteroatoms (except
for PF6-). Thermal displacement ellipsoids are drawn at the 50 % probability level.
In the crystal packing, hydrogen bonds are formed between the O4-hydrogenpyridine-2,4-dicarboxylate groups and the water solvent molecule. Each
water molecule forms a hydrogen bond with the deprotonated carboxylic group
(O5(–H5A)∙∙∙O2 = 2.692(4) Å) and with the protonated carboxylic groups of two
symmetry-equivalent Ru(II) complexes (O5(–H5B)∙∙∙O3i = 2.822(4) Å and
O5∙∙∙(H4–)O4ii = 2.552(4) Å; symmetry codes: i) 1/2+x, 3/2–y, 1/2+z; ii) 3/2–x,
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–1/2+y, 1/2–z), connecting four Ru(II) complexes over an inversion center (Fig.
2). Furthermore, multiple π–π stacking interactions were observed between the
aromatic bipyridine rings and the O4-hydrogenpyridine-2,4-dicarboxylate rings
(ring centroid–centroid distances between 4.218(2) and 5.665(2) Å).
Fig. 2. Part of the crystal packing of the structure of 1, along the c-axis, showing hydrogen
bonds between the water solvent molecules and the O4-hydrogenpyridine-2,4-dicarboxylate
groups, with the atom-labeling scheme of the specific atoms involved. Symmetry codes:
i) 1/2+x, 3/2–y, 1/2+z; ii) 3/2–x, –1/2+y, 1/2–z.
Electrochemistry
The electrochemical character of the complex was studied by cyclic voltammetry in DMSO at different scan rates (25, 50, 100, 150, 200 and 300 mV s–1) in
the –2.50 < E < 1.00 V potential range (Fig. 3). The recorded voltammograms
show a reversible wave at ≈0.30 V vs. Ag/AgCl, which could be readily assigned
to the Ru(II)/(III) redox couple. The calculated ΔEp values tend to slightly increase with scan rate (from 100 to 210 mV), indicating the partially reversible
nature of the redox process. In the region of negative potentials (–2.35 < E <
< –1.15 V), multiple partially reversible peaks could be observed. This type of
reductive activity could be assigned to the subsequent reductions of the bipyridyl
moiety. In comparison to the literature data,30–32 the novel Ru(II) complex shows
no exceptions concerning its electrochemical behavior.
Cytotoxic activity
The antiproliferative activity of the prepared complex was assayed in two
human cancer cell lines (A549, K562) and non-tumor MRC-5 cells, by the MTT
assay. The tumor cells were incubated for 72 h with the investigated complex.
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The results of these tests indicated that the complex after 72 h of incubation
exhibited no cytotoxic activity with IC50 > 300 μM for A549, and a moderate
activity with 177.63±2.28 μМ for K562 (Table I). Moreover, the investigated
complex did not show cytotoxic activity towards non-tumor MRC-5 cells. These
values are the mean of 2 to 3 independent experiments, whereby the standard
deviations were less than 15 %.
Fig. 3. The cyclic voltammograms for 1 recorded in DMSO (0.1 mM TBAP) at a glassy
carbon electrode for scan rates 25, 50, 100, 150, 200 and 300 mV s-1.
TABLE I. Cytotoxicity of the tested agent in terms of IC50 values (µM) obtained by the MTT
assay for 72 h of continuous drug action; > 300 denotes that an IC50 value was not obtained in
the range of concentrations tested up to 300 μM
Compound
1
A549
> 300
K562
177.63±2.28
MRC-5
> 300
CONCLUSIONS
The complex [RuL(bpy)2]PF6·0.5H2O, where L is O4-hydrogenpyridine-2,4-dicarboxylate, was characterized by means of 1H-NMR, elemental analysis, ESIMS, IR and single-crystal X-ray analysis. The bidentate ligands are coordinated
in the cis position, yielding a complex of octahedral geometry. In addition, the
electrochemical properties of the synthesized complex were investigated and the
obtained results indicated that its electrochemical behavior was in accordance
with literature data for Ru(II) complexes. The cytotoxic studies showed that the
synthesized complex exhibited moderate biological activity towards human
cancer cell K562, which may be due to the unfavorable ligand dissociation
kinetics and off-target reactivity, when once in solution. Further research on this
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topic will be based on the investigation of cytotoxic activity of this compound on
numerous cancer cell lines and determination of its mode of action.
SUPPLEMENTARY MATERIAL
CCDC 1524673 contains the supplementary crystallographic data for this paper and it
can be obtained free of charge via www.ccdc.cam.ac.uk/conts/retrieving.html (or from the
Cambridge Crystallographic Data Centre, 12, Union Road, Cambridge CB2 1EZ, UK; fax:
+44-1223-336033; or deposit@ccdc.cam.ac.uk).
Analytical and spectral data of the synthesized compound are available electronically at
the pages of journal website: http://www.shd.org.rs/JSCS/, or from the corresponding author
on request.
Acknowledgements. The authors acknowledge the support from the Ministry of Education, Science and Technological Development of the Republic of Serbia (Project No.
172035). KVH thanks the Hercules Foundation (project AUGE/11/029 "3D-SPACE: 3D
Structural Platform Aiming for Chemical Excellence") and the Research Foundation – Flanders (FWO, project 1.5.216.15N) for funding. DS thanks the Magbiovin project (FP7-ERAChairs-Pilot Call-2013,Grant agreement: 621375).
ИЗВОД
НОВИ РУТЕНИЈУМ(II) БИПИРИДИНСКИ КОМПЛЕКС: СИНТЕЗА,
КАРАКТЕРИЗАЦИЈА И ЦИТОТОКСИЧНОСТ
AFYA A. BAROUD1, ЉИЉАНА Е. МИХАЈЛОВИЋ-ЛАЛИЋ2, ДАЛИБОР СТАНКОВИЋ2,3, МАРИЈАНА
КАЈЗЕРБЕРГЕР4, KRISTOF VAN HECKE5, САЊА ГРГУРИЋ-ШИПКА1 и АЛЕКСАНДАР САВИЋ1
1
2
Хемијски факултет, Универзитет у Београду, Студентски трг 12–16, Београд, Иновациони центар
3
Хемијског факултета, Студентски трг 12–16, Београд, Институт за нуклеарне науке Винча,
4
Универзитет у Београду, п. пр. 522, 11001, Београд, Институт за онкологију у радиологију Србије,
5
Пастерова 14, Београд и XStruct, Department of Inorganic and Physical Chemistry, Ghent University,
Krijgslaan 281-S3, B-9000 Ghent, Belgium
Нови рутенијум(II) бипиридински комплекс са O4-хидроген-пиридин-2,4дикарбоксилатом је синтетисан и окарактерисан помоћу IC и NMR спектроскопије,
масене спектрометрије и рендгенске и елементалне анализе. Електрохемијски карактер
комплекса је испитан цикличном волтаметријом указивајући на Ru(II)/Ru(III) трансфер
електрона у опсегу позитивних потенцијала. Насупрот томе, у опсегу негативних
потенцијала запажени су вишеструки реверзибилни пикови који представљају сукцесивне редукције разгранатог бипиридилског дела. Цитотоксична активност комплекса
испитивана је на две хумане ћелијске линије канцера: A549 (канцер плућа) и K562
(леукемија) као и на нетуморској ћелијској линији MRC-5, MTT тестом. Добијене IC50
вредности су > 300 и 177,63±2,28 μM за A549 и K562 ћелије, редом.
(Примљено 9. јануара, ревидирано 18. јануара, прихваћено 23. јануара 2017)
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